Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3164 |
Symbol | |
ID | 1170858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3300778 |
End bp | 3301545 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637344981 |
Product | hypothetical protein |
Protein accession | NP_718720 |
Protein GI | 24374677 |
COG category | [S] Function unknown |
COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA ATATCCAGAT TATCCGCTAT CAAGAATGCG AATCGAGCTT ATGGAAAAAT GGCGGCGGCA GCACTAAACA ACTGTTAATA TCGCCAAAGG ATGCTGACCT AACTAACTTT GATTATAGGA TTAGCATTGC CACCATTTCG AGCGATGGCC CCTTCTCACC ATTTCCCGGC ATAGATAGGC AGCTGTGTAT ATTAGAAGGT GCAGGCGTAA AACTTAAGAT GATGTCTGAT GATTTGGCTG AGCCAAATCA ATTAATCCTT CGCCCCAATG AGCCGGCATT TTGTTTTAGC GGCGAGACTC AGATCGAAAG CAAACTCTTA GATAAGCAAA TTATCGACTT TAATGTAATG ACTAAACGCG GCAAGTACCG CGCGTATATT GAGCGGCTTG AGTTGAATGG CTCGTTAAAC CCTGAGTCTA GTGAAACCAG CCATATTGAC GATGCTCATC AAACACCAAA TGTACACAAT AACGAGTTGC AACAGTGGTT ATTGTGCCTT GAACCGCTGA ACTTAGTTTA CCAAGGCCAA ATTATTCAAC TTAAGCGTTA TGATATGGTG CAATGCCTAC GAGGCCAGAA TTTAAAAGCG CAGCCGTCAG AAATGCAGCG ATTAGAAGAA GTTGAAACTT CCGATGCAAC CTCTTCAGAC GCTGAACTAC CAATACTTAA GCACACACAT ATAGAAAACC CGTCCCTACT ATACCATAAA CAATGTCAGG TACTGCGTAT CGTTATAGAA TGCACTAAAA AGTTCTAG
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Protein sequence | MSANIQIIRY QECESSLWKN GGGSTKQLLI SPKDADLTNF DYRISIATIS SDGPFSPFPG IDRQLCILEG AGVKLKMMSD DLAEPNQLIL RPNEPAFCFS GETQIESKLL DKQIIDFNVM TKRGKYRAYI ERLELNGSLN PESSETSHID DAHQTPNVHN NELQQWLLCL EPLNLVYQGQ IIQLKRYDMV QCLRGQNLKA QPSEMQRLEE VETSDATSSD AELPILKHTH IENPSLLYHK QCQVLRIVIE CTKKF
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