| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3136.1 |
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| Symbol | |
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| ID | 1170825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3266258 |
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| End bp | 3267925 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637344952 |
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| Product | two-component sensor histidine kinase |
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| Protein accession | NP_783509 |
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| Protein GI | 28275254 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCCA TGACGCCAAA AGCCAAACAA CGTCTGTTTA TGACCATAGT GCTACTTGCA
GGTTTATTTG CCATCTTAAA ATTAACTTAC TGGGTGCATT TTTATCAGGG CAAAATCGAC
ATCCAACAAC AATCAGAGAA ACAACTCAAA GAACTAGTGA GCTTTTTAGA TGGTGCCCTG
TCGCGGTATG AGAGTATTCC CCATGTGCTC TCTACCAATC CTATGCTTGC CAATGTGCTC
AACGACCAAC AAAATCCGCA AAAGGTACAA GAGCTCAACC TCTATTTAGA AGAAATTCAG
CATGTCACCG AGGCTTCTGA TATTTACCTA ATTGATGCGC TAGGAATTGC GATTGCAGCC
AGCAACTGGC AACAGCCTTT TTCATTTATC GGCAAAGACT ACTCTTTTAG ACCCTATTAC
ACCGATGCAA TTTCAGGCAA TTTAGGTCGC TACTATGCGG TGGGCACCAG CTCGGATAAA
CGCGGCTTTT ACTTTTCTTA TCCCATTTAT CAGCAAGGTG GAAAAGGCAT TCTGGGCGCC
ATTATTGTGA AAGTGGATAT CGCCGATATT GAGCAGCAAA GCACCAGTAT AGCGATGGCA
GGCCAATACC AATTTTTAAT CAGCGATCCC GACGATATTG TGTTTATTTC CAGTGTGGAT
GAATGGCGTT TAACCTCACT GACACCGCTA ACCCAAGCCA AACAATATGC CTTAAATGCC
TCAAAACGTT ACGCTGAGCG CCCCATTGGC GAACTTATAA TAAAACCACA ATATCAAGAC
GATAGCACCA GCAGCGGTCA TATCTATCAC ATCCGCGAAG GCAACAGTCA GGCGCAATAT
ATGGATACCC ATCATTTGAT GACCAAAGCC GGTTGGCGGG TGCATATTCT TGCGCCACTG
AAACCGCTTC ACGAGTCAAT GCCTGCCCTC ATGCTGTTAT CGGCATCAAT CTACTTGCTG
CTAGCCTTAG GTTTGCTCTT TAGCAGTGAG CGGCGCCGTA ACTTGCAGCG CATGCAATTA
GCCCAAAGTT TGCTGGAGCA ACGAGTTGAG GAACGAACTT ACGATCTGCA GCAAGCCAAT
GACCGCCTAA AAGATACCCA AGATGAATTG ATCCAAGCTG CCAAATTAAC CGTCATCGGT
AGTTTATCCG CCAGCATCAA CCACGAGCTT AACCAGCCCT TGGCGGCCCT TCGCAGCTAC
GCGCAAAATA CCCAAACCTT CCTTGCCCGC AATATGCAAG ATAAGGCATT GGATAATTTG
AAGATTATTA TCGAGCTAAC CGACCGCTTA GCCGATATTG TTGGCCAATT TAAAAGCTTT
ACTCGTAAGA GCCAAGGCAC GGATAGCGCG ACCGATCTTA AGGGCTGCAT CAAACAAGCA
CTAACCATAG TCCAACCCGA AATCGACAAA CAAGGGGTTG AGCTCGATGT GCTTTTGCCC
GAAGGACAAT ATCAGGTCTG GGGCGACAAG GTGCGATTGC AGCAAGTGTT TGTCAATATT
ATGAGCAACG CCATTGTCGC CATGCAGCAA TCGGTAATAC GTAAGCTGAG TATTAGGGTA
AACTGCCAAG ACAAGTTCTG TATCAGGATT CAGGCCCTGG CGTGCGCGAA AGCCAAATGG
AGAAAATATT CGAGCCTTAT TTCACTACCA GCGAGCGCAC TGGCTTAG
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| Protein sequence | MLPMTPKAKQ RLFMTIVLLA GLFAILKLTY WVHFYQGKID IQQQSEKQLK ELVSFLDGAL
SRYESIPHVL STNPMLANVL NDQQNPQKVQ ELNLYLEEIQ HVTEASDIYL IDALGIAIAA
SNWQQPFSFI GKDYSFRPYY TDAISGNLGR YYAVGTSSDK RGFYFSYPIY QQGGKGILGA
IIVKVDIADI EQQSTSIAMA GQYQFLISDP DDIVFISSVD EWRLTSLTPL TQAKQYALNA
SKRYAERPIG ELIIKPQYQD DSTSSGHIYH IREGNSQAQY MDTHHLMTKA GWRVHILAPL
KPLHESMPAL MLLSASIYLL LALGLLFSSE RRRNLQRMQL AQSLLEQRVE ERTYDLQQAN
DRLKDTQDEL IQAAKLTVIG SLSASINHEL NQPLAALRSY AQNTQTFLAR NMQDKALDNL
KIIIELTDRL ADIVGQFKSF TRKSQGTDSA TDLKGCIKQA LTIVQPEIDK QGVELDVLLP
EGQYQVWGDK VRLQQVFVNI MSNAIVAMQQ SVIRKLSIRV NCQDKFCIRI QALACAKAKW
RKYSSLISLP ASALA
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