Gene SO_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2865 
Symbol 
ID1170558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2988262 
End bp2988882 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID637344684 
ProductL-lysine exporter, putative 
Protein accessionNP_718437 
Protein GI24374394 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGG CGTTTATTCA AGGTATGGGC ATTGGTGGTA GTTTGATTAT TGCCGTAGGG 
GCGCAAAATG CTTTCGTGCT AAAGCAAGGG ATTAAGCGTG CTTACCCTTT GCCGATTGCG 
CTGCTTTGTT CGATTATCGA TGCCTTGATG ATTACCGCGG GTGTGGCAGG GCTTGGGCAT 
ATTATTGAGA CCTTTCCGAC CATTAAGCAC GTGGCGAGTT TTGGTGGTGC GGCTTTTTTG 
ATTTGGTACG GTGCCAATGC GCTTAAGGCC TCTTTTGTTA CCAAGGGGAT GGAGATGGAT 
CACGCGCAAA ATGCTGATAC TCTGCGTAAA GCCATCTTGA CCACCCTAGG CATAAGTCTA 
CTCAATCCAC ACCTTTATTT AGATACTGTG GTGTTGCTTG GTAGTATCAG TACTCAGTTT 
GAAGATGCTC ACCGTCCTTG GTTTGGCGCC GGTGCAGTAT TGGCTTCTTT TATTTGGTTC 
TTTAGCCTAA GTTTTGGTGC ACGTTTGTTG GCGCCTATTT TTAGTCGTCC AGCGGCATGG 
CGTTATTTAG ACCGCTTTAT TTGGCTGACG ATGTGGAGCA TTGCTGCGGC CATTATCTGG 
CCATACCTTG CCGCAATTTA A
 
Protein sequence
MQTAFIQGMG IGGSLIIAVG AQNAFVLKQG IKRAYPLPIA LLCSIIDALM ITAGVAGLGH 
IIETFPTIKH VASFGGAAFL IWYGANALKA SFVTKGMEMD HAQNADTLRK AILTTLGISL 
LNPHLYLDTV VLLGSISTQF EDAHRPWFGA GAVLASFIWF FSLSFGARLL APIFSRPAAW 
RYLDRFIWLT MWSIAAAIIW PYLAAI