| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2856 |
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| Symbol | |
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| ID | 1170551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2979531 |
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| End bp | 2981393 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344677 |
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| Product | CBS domain-containing protein |
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| Protein accession | NP_718428 |
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| Protein GI | 24374385 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCA GTGAATTACA GCCTGTTGTG CAGTTTTTAA CATCCACAGC CCCCTTCGAT
ACTTTTTCTG AAGAGTTTAT TCGACGTTGT GCAAAGGCCG TTATTATCGG TTACTACAGT
AAAGCCTCAG GTTTTGTGCA ATTTGATGCC GAGGCTCCCA AATTGTATTT GGTGCGTAGC
GGTGCCTTTG AAGTGCGGGA TCCAGAGGGT GTGTTACTCG ATAGGGTCGC AGAGGGGGAG
TTTTTTGGTT TTTCGACTTT ACTGTCAGGG GAAAAAGTCG TTAACCGAGT CGCTATTCTT
GAAGATAGTT TGGTGTATCA CTTTCCGCAG GCGCTATTTG ACCAACTGCG AAGTGAAAGC
CGGCATTTCG ATAAATTTTT TACCCGAGCT TTTGCTAAGC GTTTACGTCA TGAAGCACGT
TTTAAGGCTA AAGATCTAGC TACAACGAGC CGCATCAGCA CCTTGATGTC ATCTTCGCCG
ATTACGATCG ATGCCCATGC CACTGTCACG CAAGCCGCAC TCTTGATGCG CAATTCGCGG
GTATCTTCTT TATTAGTGAC TGATAATCAT AAACTTGTTG GCATATTAAC CGACAAGGAT
TTACGCAATC GAGTGCTTGC CTCCGGACTA GATGGCCAAA TCGCTGTGCA TCAAGCGATG
ACCACATCGC CGATTTCAAT CTCTTCTAAT GCACTGATCT TTGAAGCCAT GCTATTGATG
AGTGAGCACA ATATTCATCA CCTGCCGATT ATTGATGAGC AAAATACCGA TGAAGTGAAA
GCCATTGGTA TGGTGACCAG TACCGATATT CTGCGTGGTC AAGGTTCACA GCCATTACTG
CTTATTGGTG AAATCGAGCG CCAACGTGAT CTCGCCAGCT TGATTAGTGT CAGTAAACAA
ATTCCAGTGC TACTACAAAA TTTAATCAGT GCCGATGCGA GGGCGGAGGA AATTGGCCGA
GTGTTGACCT CGGTGACCGA TGCATTAACC CGCCGATTAA TCGTACTTAA TCAACAGATC
CTAGGTGAGG CACCGATGGC CTTTTGTTGG TTAACTTTTG GCTCGCAAGG ACGCCAAGAT
CAGGCCGCGT GTTCAGATCA AGATAATGGT TTGCTGGTGG CAGAAGAAAT GGATGATTTT
GCAAAGGGCT ACTTTGATGC GTTAACCCAT GCGGTTTGTG CTGGCCTTGA CCAATGTGGC
TATATGTTTT GTCCCGGCAA TATCATGGCG CAGAATCCTA AGTGGCGAAT GTCACTCAAC
CAATGGCAAA AAGTATTTGA AAAATGGGTC ATCACTCCTG AGCCTAAAGC ATTGATGCAC
GCCAGTATTT TCTTCGATAT GCGCTCGGTT TATGGTCCGC AATCGTTGTT TGATGCATTG
CAGGATAAAG TGCTAGCACA AACCAAAGAC AATGATATTT TCCTAGCGGG AATGGCGGGT
AACTCACTGA TAGAATCACC TCCACTGGGT TTTTTTAGAA AATTTGTATT AGAACGCGAT
GGTAGCGAGG TTAAAGGCAT TGATTTAAAA CATAAAGGTA ATGCTTTGAT CAATGATATC
GCCCGAGTGT ACGCCTTGTC GGCAGGCATT AGGGAAGTGA ATACGGCCAA ACGCATTCGC
GCGCTAATGG ACGCCAATAT TCTCAATCGT AAGGATGCAC TTAATTTAGC CGATGCCCAT
GAATTTATTG CCCATATGCG GTTATCGAAC CAAGGTTATC AGCATACACA GGGACTGAAG
ATCAGTAACT ATTTATTGCC AGGCCATTTA TCCTCTTTAG TGCGTCATCA ACTTAGGGAT
GCCTTTAAGG TTGTCCATGA TGCCCAATCG GGCATGAAAA TGAAATTTAT GCGGAGCTTT
TAA
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| Protein sequence | MNASELQPVV QFLTSTAPFD TFSEEFIRRC AKAVIIGYYS KASGFVQFDA EAPKLYLVRS
GAFEVRDPEG VLLDRVAEGE FFGFSTLLSG EKVVNRVAIL EDSLVYHFPQ ALFDQLRSES
RHFDKFFTRA FAKRLRHEAR FKAKDLATTS RISTLMSSSP ITIDAHATVT QAALLMRNSR
VSSLLVTDNH KLVGILTDKD LRNRVLASGL DGQIAVHQAM TTSPISISSN ALIFEAMLLM
SEHNIHHLPI IDEQNTDEVK AIGMVTSTDI LRGQGSQPLL LIGEIERQRD LASLISVSKQ
IPVLLQNLIS ADARAEEIGR VLTSVTDALT RRLIVLNQQI LGEAPMAFCW LTFGSQGRQD
QAACSDQDNG LLVAEEMDDF AKGYFDALTH AVCAGLDQCG YMFCPGNIMA QNPKWRMSLN
QWQKVFEKWV ITPEPKALMH ASIFFDMRSV YGPQSLFDAL QDKVLAQTKD NDIFLAGMAG
NSLIESPPLG FFRKFVLERD GSEVKGIDLK HKGNALINDI ARVYALSAGI REVNTAKRIR
ALMDANILNR KDALNLADAH EFIAHMRLSN QGYQHTQGLK ISNYLLPGHL SSLVRHQLRD
AFKVVHDAQS GMKMKFMRSF
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