Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2778 |
Symbol | fabH-1 |
ID | 1170478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2899962 |
End bp | 2900921 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637344607 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | NP_718359 |
Protein GI | 24374316 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATACAA AAATTCTCGG AACTGGTAGT TACGTACCGG TGCAGGTGCG TAGTAATCAA GATTTGGAAA AAATGGTGGA AACCAGTGAC CAATGGATTG TGGAACGCAC TGGTATTTCA GAGCGTCGCA TTGCGGCGCA AGATGAAACA GTCTCAACTA TGGGCTATCT GGCGGCATTA AATGCGCTAG AGATGGCCGG CATAGAAGCA TCAGATTTAG ATATGATCAT TTGTGGCACC ACCAGTGCGG CAAATGCATT CCCAGCAGCA GCATGCGAAA TTCAAGCGAT GCTTGGCGTT CATACCATTC CGGCCTTTGA TATTGCGGCG GCCTGTTCCG GTTTTGTCTA TGCCTTATCT GTAGCAGACC AATTCGTTAA AAATGGTACC GCGAAAAAAG TGCTCGTCAT TGGTGCAGAC GTATTGTCCC GCCTATGCGA GCCAGAAGAT CGCACCACCA TTATTCTGTT TGGTGATGGC GCGGGTGCGG CAATTATCGG TGCCTCCGAT GAGCCTGGGA TTATCTCTAC CCATATTTAC GCTGATGGTC GTCAAGGTGA CTTGCTGAAA TGTGCTTTTC CACCGCGTCA AGGAGAAACT TCCGAAGCGG TAGGGTTTAT GACCATGAAA GGTAATGACG TCTTTAAAGT GGCTGTCACG CAGTTATCTC ATGTCGTGAC TGAAACATTA CGCCTTAATA ATATCGACAA GTCGGAAATC GACTGGTTGG TGCCGCATCA GGCGAATTTC CGCATTATTA ATGCCACGGC GAAAAAGCTC GATATGAGCT TAGATAAAGT GGTATTAACA CTGGCTAAGC ACGGTAACAC GTCAGCGGCA TCGGTGCCGA TTGCCTTGGA TGAAGCCGTT CGTGATGGCC GGATCCAACG TGGCCAGTTG TTGCTGCTCG AAGCCTTTGG TGCTGGTTTT GCGTGGGGCA GTGCGCTCGT CCGTTTTTAA
|
Protein sequence | MHTKILGTGS YVPVQVRSNQ DLEKMVETSD QWIVERTGIS ERRIAAQDET VSTMGYLAAL NALEMAGIEA SDLDMIICGT TSAANAFPAA ACEIQAMLGV HTIPAFDIAA ACSGFVYALS VADQFVKNGT AKKVLVIGAD VLSRLCEPED RTTIILFGDG AGAAIIGASD EPGIISTHIY ADGRQGDLLK CAFPPRQGET SEAVGFMTMK GNDVFKVAVT QLSHVVTETL RLNNIDKSEI DWLVPHQANF RIINATAKKL DMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL LLLEAFGAGF AWGSALVRF
|
| |