Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2772 |
Symbol | |
ID | 1170472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2895188 |
End bp | 2895667 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344601 |
Product | cytosolic long-chain acyl-CoA thioester hydrolase family protein |
Protein accession | NP_718353 |
Protein GI | 24374310 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGTA TCGATAGACA AATTACCCTG AGATTTTTGT CAGAGCCTGC GGATGTGAAT TTTGGTGGTA AGGTTCACGG TGGCGCTGTG ATGAAATGGA TTGACCTTGC AGCCTATGCC TGTGCTGCGG GGTGGAGTGG TAAATATTGT ATTACCGCTT ACGCAGGTGG TATTCGATTT GTTCAACCGA TTTTAGTGGG CAACATTGTC GAAGTTAGCG CGAAGGTGAT TTATACCGGT AAAACCTCTA TGCATATTGG TATCGATGTG CGGGCCGGCG ATCCTAAGGT TTCAGAGCGG CATCTTACGA CTCACTGTAT TGTCATCATG GTTGCAGTCG ATGAACAAGG TCAGCCCACG CCAGTACCTG AGTGGGTGCC ACAGACTGAA AATGATATTC ACCTTCGAGA TTCTGCACTG CGCTTAATGG AGATGCGTAA GAAAATTGGT GCCGAAATGG AAGCCCATGT ACAGAAATAA
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Protein sequence | MAGIDRQITL RFLSEPADVN FGGKVHGGAV MKWIDLAAYA CAAGWSGKYC ITAYAGGIRF VQPILVGNIV EVSAKVIYTG KTSMHIGIDV RAGDPKVSER HLTTHCIVIM VAVDEQGQPT PVPEWVPQTE NDIHLRDSAL RLMEMRKKIG AEMEAHVQK
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