Gene SO_2757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2757 
Symbol 
ID1170458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2878837 
End bp2880156 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content48% 
IMG OID637344588 
Producthypothetical protein 
Protein accessionNP_718339 
Protein GI24374296 
COG category[R] General function prediction only 
COG ID[COG2056] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG TCGTTATTGC TGTGTGTTTA ATGTTAGCCC TCAGTTTAGC AAGGGTGAAT 
GTGGTTGTTG CGCTCACTAT CAGTGCCCTG GTTGCAGGTT TAGTCGGGGG AATGGATCTG
CATCGCACCA TTGATGCCTT TAACACGGGA TTAGGTGGCG GCGCACAAAT CGCCCTCAGC
TATGCCTTAC TGGGTGCGTT TGCGGTGGCA TTATCCCATT CAGGCTTAAC AACACTGATT
TCAAACTCGA TCATTAAAAG CCTTGGCCGA GAGCCCAATG CAACAAACAC CAATTGGGTG
CGCTGGTTGC TATTATTATC ATTGCTGGCA ATGTCGATGG CATCGCAAAA TATCCTGCCA
ATCCATATCG CCTTCATTCC GATTTTAGTG CCACCACTCT TGCATGTGAT GACCAAACTG
AATATCGACC GCCGCTTGGT CGCCTGTGTG CTGACCTTTG GTCTTGTCAC TACCTATATG
ATTTTACCCG TGGGTTTTGG TGGAATTTTC TTAAATGATA TTTTGTTATC CAACCTGACA
AGTAATGGCT TAGTCGCTGT GCGTGACCAA ATTCCCCCTG CCATGTTGAT CCCCGCAGCG
GGCATGGTGG TCGGTTTATT GATCGCTGTT TTTGTCAGTT ATCGCAAGCC ACGGGTATAT
GATGAAACTA AAGTTCTCAG TGCCGAGCCA GAAGAAAAAC TGAATAAGCG CAATATCGTT
ATCGCTGCAT TAGCCATCCT TGCCACCTTG TTTGTGCAGC TAGAGACAGA TTCAATGATC
TTCGGCGCCT TAGTCGGCTT TATGATCTTT AGTTTCTCGG GCGCTCTAAA ACACGTAGCC
GACCAAGATA TCTTTACTCA GGGTGTGCGC ATGATGGCCA ACATCGGTTT TATCATGATC
TCCGCCGCGG GTTTTGCCGC AGTTGTGAAA GAAACCGGTG AAGTCGGTAC GCTGGTTTCA
TCATTAAGCT CGTTGATTGG CGACAATAAA GCCCTCGCCG CCTTTTTGAT GTTAGTCGTG
GGTCTCTTAA TCACGATGGG AATTGGGTCT TCATTTTCAA CCATTCCGAT TATCGCGACC
ATTTATGTGC CCTTGGCGCT AAGCTTTGGG TTTTCAGTAC CCGCAACCAT CGCGCTAGTA
GGTACAGCTG CTGCTTTGGG AGATGCAGGC TCTCCAGCGT CAGACTCGAC ACTTGGCCCA
ACATCCGGCT TAAATGCCGA TGGCCAACAC GATCATATCC GCGATAGCGT TATCCCAACC
TTTATTCACT ACAATATTCC CTTGTTAGTC TTTGGTTGGA TTGCCGCCAT GGTGCTCTAA
 
Protein sequence
MNAVVIAVCL MLALSLARVN VVVALTISAL VAGLVGGMDL HRTIDAFNTG LGGGAQIALS 
YALLGAFAVA LSHSGLTTLI SNSIIKSLGR EPNATNTNWV RWLLLLSLLA MSMASQNILP
IHIAFIPILV PPLLHVMTKL NIDRRLVACV LTFGLVTTYM ILPVGFGGIF LNDILLSNLT
SNGLVAVRDQ IPPAMLIPAA GMVVGLLIAV FVSYRKPRVY DETKVLSAEP EEKLNKRNIV
IAALAILATL FVQLETDSMI FGALVGFMIF SFSGALKHVA DQDIFTQGVR MMANIGFIMI
SAAGFAAVVK ETGEVGTLVS SLSSLIGDNK ALAAFLMLVV GLLITMGIGS SFSTIPIIAT
IYVPLALSFG FSVPATIALV GTAAALGDAG SPASDSTLGP TSGLNADGQH DHIRDSVIPT
FIHYNIPLLV FGWIAAMVL