| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2738 |
|---|
| Symbol | bioC |
|---|
| ID | 1170436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2853336 |
|---|
| End bp | 2854163 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637344560 |
|---|
| Product | biotin synthesis protein BioC |
|---|
| Protein accession | NP_718322 |
|---|
| Protein GI | 24374279 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATGC CGCTTGGCGT GAGTGTTAAT TCCCATCAAT CTGCCAGTCA GGTCGAGCAT
ATTGCCGATC GGTTTTCTGC TGCTGCCAAG CACTATCAAG AGCATAACTG TTTACAGCGT
TTAAGCGGTG CGAGTTTGTT GCAGGGATTT GTTGCCAAAG GCGCAATTCT CGATATTGGC
GCAGGGCCGG GGACTGATTT CGCTAACCGA GCAATGGGCG AGGAGATGAG GGTTTATGCA
CTCGATATCG CTTTGGGCAT GCTGCAACAG CTTAAAACGA TTTACCCTGA GCACCAGTGT
GTTTGCGGCA ATGCCGAGCA ATTACCCTTT GTAGATAGGA GTATCGATTG TATTTACTCC
AATTTGGCTC TGCAGTGGTG CCATGATTTT TCAGCGGCAA CCAGCGAAAT GGCCAGAGTC
TTAAAATCGG GTGGAGAAGC TCACCTGAGT ATCGTGGCAG CAGGCAGCCT GGCTCAGTTA
TCTAATCTTG GTTTGAGGGT AAATGGTTTC TTATCTCTTG AAAGCTTACA AGCGGCATTT
GACGACACAG ATTGGCAATT TCTTGATGTG AAGCTCATGC CAATGACCGT CTATTTTCAA
GATCTTAAAG CCTTACTCTA TTCCATTAAA GGCGTGGGCG CATCGGTGCA ATCCTCAGTA
CAGACAGTAA CTTCTTCTGA ATCCGATGCC CATTTTGGTA AATTGCGTGG CCGCCACGAT
TGGCAGGCTT TACAACAACG AGCAGAGCAA TTTCGTGAGG CACAGGGCTT GCCTTTAACC
TATCAGATCG CCCAATTTCG TGTGCGTCGC CAAGGCGGCT CGGTATAA
|
|---|
| Protein sequence | MSMPLGVSVN SHQSASQVEH IADRFSAAAK HYQEHNCLQR LSGASLLQGF VAKGAILDIG
AGPGTDFANR AMGEEMRVYA LDIALGMLQQ LKTIYPEHQC VCGNAEQLPF VDRSIDCIYS
NLALQWCHDF SAATSEMARV LKSGGEAHLS IVAAGSLAQL SNLGLRVNGF LSLESLQAAF
DDTDWQFLDV KLMPMTVYFQ DLKALLYSIK GVGASVQSSV QTVTSSESDA HFGKLRGRHD
WQALQQRAEQ FREAQGLPLT YQIAQFRVRR QGGSV
|
|---|
| |