| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2633 |
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| Symbol | mnmA |
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| ID | 1170335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2768717 |
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| End bp | 2769835 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344459 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | NP_718217 |
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| Protein GI | 24374174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATCAA TCGAACCCAC TCATACAGGT AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT
GTTGATTCAT CCGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT
TTCATGAAGA ACTGGGAAGA AGATGACAAC GACGAGTACT GCGCGGCCGC CGAAGATTTA
AAAGATGCTC AAGCCGTTTG CGATAAGCTT GGGATCAAAC TCCACACGGT CAACTTTGCT
GCCGAATATT GGGACAATGT ATTTGAGTAT TTCCTTGCCG AATACAAGGC GGGTCGTACC
CCCAATCCCG ATATCATGTG CAACAAAGAA ATCAAATTTA AGGCCTTTTT AGAGTTTGCC
GACGATATTC TCGATGCCGA CTACATCGCC ATGGGTCACT ATGTGCGCCG CCGCGATAAC
GAGGATGGCA CGACGCAAAT GCTGCGCGGT GTCGACAACA ATAAAGATCA AAGCTATTTC
CTGTACACCT TAAGCCATGA GCAAGTGGCG CGCAGTCTGT TTCCGGTGGG TGAACTCGAA
AAACACGAAG TACGCGAAAT CGCCAAACAA ATGGGATTAA TTACCCATGA TAAAAAAGAT
AGCACCGGCA TTTGCTTTAT CGGCGAGCGA AAATTTACTG AATTTTTAGG TAATTACTTA
CCCGCACAGC CCGGCAATAT CGAAACCGCC GATGGTGAAG TGATTGGCAC GCACCAAGGT
TTGATGTACC ACACTTTAGG CCAACGTAAA GGTTTGGGGA TTGGCGGCAT GAAAAACAGC
AACGACGACC CATGGTACGT GGTGGATAAA GATCTCAAAC GTAACGTGCT TGTTGTTGGC
CAAGGTGGTC ACCACCCGCG CTTGATGTCC AATGGCATGT TAGTCAATCA ACTGCACTGG
GTCGATCGTA AAGGCCCTAT CAATGGCAGC CAGATTGTGG TGAAAACCCG TTATCGTCAG
CAGGATATCC CCTGTACCCT CACCTATCTA GATGACAATA CGCTCAAAGT CGTGTTTGAT
GAGCCCGTTG CAGCCGTAAC GCCCGGGCAG TCAGCCGTCT TTTACGATGG CGAAGTATGC
CTCGGTGGCG GGATTATCGA TCAACTGATC CGAGGATAA
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| Protein sequence | MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN DEYCAAAEDL
KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLEFA
DDILDADYIA MGHYVRRRDN EDGTTQMLRG VDNNKDQSYF LYTLSHEQVA RSLFPVGELE
KHEVREIAKQ MGLITHDKKD STGICFIGER KFTEFLGNYL PAQPGNIETA DGEVIGTHQG
LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLKRNVLVVG QGGHHPRLMS NGMLVNQLHW
VDRKGPINGS QIVVKTRYRQ QDIPCTLTYL DDNTLKVVFD EPVAAVTPGQ SAVFYDGEVC
LGGGIIDQLI RG
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