Gene SO_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2617 
Symboludk 
ID1170319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2752787 
End bp2753425 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID637344444 
Producturidine kinase 
Protein accessionNP_718202 
Protein GI24374159 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTC AGCAGTGTGT CATTATAGCA ATTGCTGGCG CGTCAGCATC TGGCAAGAGT 
TTAATTGCCA AGACGATTTT TGACGAACTT CGCCGCGATT TAGGCACAGA TCAGATTGGG 
GTAATTAACG AAGACGCGTA CTATCGCGAT CAGAGTCATT TATCCATGGA TGAGCGGGTG 
TTAACAAACT ACGACCATCC CAAAGCGTTA GACCATCAAC TGTTATGCAC GCACTTGCAG 
TTACTTAAGT CTGGCGAAGC TGTTGATATT CCTTGCTATA GCTATACCGA ACATACGCGT 
ATGGCCGAAA CCGTTAAAAT GACACCGAAA AAAGTGATCA TTTTAGAGGG CATTCTGCTG 
TTAACTGATC CTAAATTGCG TGAATTGATG GATGCCAGCG TGTTTATGGA TACGCCGCTG 
GACATTTGTT TCCTGCGCCG TTTAACCCGC GATGTGGCTG AACGTGGCCG TACGATGGAA 
TCGGTGATTT CACAGTACAA GAAAACCGTC CGTCCTATGT TCCTGCAATT TATTGAACCT 
TCAAAACAAT ACGCTGATAT TATCGTGCCC CGCGGTGGCA AAAACCGTAT CGCGACCGAT 
ATTTTGAAGA CTCGAATCCA ACATCTACTG GCAAAATAA
 
Protein sequence
MNSQQCVIIA IAGASASGKS LIAKTIFDEL RRDLGTDQIG VINEDAYYRD QSHLSMDERV 
LTNYDHPKAL DHQLLCTHLQ LLKSGEAVDI PCYSYTEHTR MAETVKMTPK KVIILEGILL 
LTDPKLRELM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYKKTV RPMFLQFIEP 
SKQYADIIVP RGGKNRIATD ILKTRIQHLL AK