Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2581 |
Symbol | fadD-1 |
ID | 1170283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2707886 |
End bp | 2709559 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637344409 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | NP_718167 |
Protein GI | 24374124 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCAGC CTTGGATTAG ACATTTACCA AAAGATGTGC CTGCTGAGAT TAATGTGGAT CAGTATTCAT CGCTTATCGA TATGTTCGAG ACCGCGGTGG CTAAGTATGC GGATCAACCT GCATTTATCA ACATGGGGGC CACGCTAACT TACCGCAAAC TCGAAGAACG CAGTCGCGCG TTTGCTGCTT ATTTACAAAA TGAATTGAAG CTGCAGAAGG GCGACCGTGT TGCACTCATG ATGCCCAATT TATTGCAGTA CCCCATTGCG CTCTTCGGTA TTTTACGTGC TGGCATGGTG GTGGTTAACG TTAACCCACT ATACACCCCT CGCGAATTAA AACACCAGTT AATTGATTCG GGTGCGAAAG CGATTGTGGT GGTGTCGAAC TTTGCTCGAA CATTAGAAGA AGTGGTCGAT CAGACGCCTG TTAAGAGTGT GATTATCACT GGACTTGGGG ATCTCTTAAG TGCGCCAAAA CGCACTTTAG TGAACTTTGT TGTTAAATAC ATCAAAAAAC TGGTACCAAA ATACGATTTA CCCCATGCAC TTTCAATGCG CGAAACGCTG TCAAGAGGTC GACGTATGCA GTACGTCAAA CCTGTTATTA CAGGGGATGA CCTCGCATTT TTACAGTATA CCGGTGGTAC GACTGGGGTT TCAAAGGGTG CCATGTTGAC CCACAGCAAT GTCGTGGCGA ACGTATTGCA GGCAAATGGT GCTTATTCGC CTGCGCTGCG AGATGGTAGT GAATTTGTGG TAACAGCATT GCCGCTTTAC CATATTTTTG CGTTAACCGT GAACTGCTTG CTGTTTTTAC ACAAGGGCAG TCAAAACCTA TTGATCACTA ACCCTCGTGA TATCCCTGGT TTTGTGGCTG AACTCAAAAA ATACCCCTTT ACCGCGCTGA CAGGTGTCAA CACCTTATTC AATGCTTTAG TTAACAGTAG TGATTTTTCT GAGTTAGATT TCTCTCGTCT AAAACTCTCC ATCGGTGGCG GCATGGCAGT GCAAAAAGCC GTGGCCGATA AATGGCAGAA CATTACCAAA ACTCGTTTAC TCGAAGGTTA TGGCCTAACA GAAGCTTCAC CGTTATTAAC CTGTTGTCCA TATAATTTAG ATGGTTACAA CGGTTCTATC GGTTTTCCTG CGCCATCAAC CTTGATCCAA GTGCGCGATG ATGCGGGTAA TGTCTTACCG CAAGGTGAGA CTGGTGAGCT GTTCGGTAAA GGCCCACAGA TCATGAAAGG GTATTGGCAA CGTCCAGAAG AAACCGCCAA AGTGATTGAT AATGACGGTT GGCTCGCCAC GGGTGATATC GGCTATATGG ATGAGCAGGG ATTCTTCTAT ATTGTCGATC GTAAGAAGGA CATGATTTTA GTGTCTGGTT TTAACGTATT CCCCAATGAA GTCGAAGAGG TGGTTGCCTT ACATCCTAAG GTGATTGAAG TGGCAGCAGT GGGTGTGCCC AATGACGCCA GCGGTGAATT AGTGAAGGTA TTTGTGGTGA AAAAAGATAA ATCTTTAACC GCTGAAGACA TCATTAAGCA TTGCCGTGTG CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC AATGTGGGTA AGATCCTGCG ACGAGAACTT AGAGACGAAG TTAAGCGTGC GTAA
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Protein sequence | MDQPWIRHLP KDVPAEINVD QYSSLIDMFE TAVAKYADQP AFINMGATLT YRKLEERSRA FAAYLQNELK LQKGDRVALM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLIDS GAKAIVVVSN FARTLEEVVD QTPVKSVIIT GLGDLLSAPK RTLVNFVVKY IKKLVPKYDL PHALSMRETL SRGRRMQYVK PVITGDDLAF LQYTGGTTGV SKGAMLTHSN VVANVLQANG AYSPALRDGS EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF TALTGVNTLF NALVNSSDFS ELDFSRLKLS IGGGMAVQKA VADKWQNITK TRLLEGYGLT EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ VRDDAGNVLP QGETGELFGK GPQIMKGYWQ RPEETAKVID NDGWLATGDI GYMDEQGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK VIEVAAVGVP NDASGELVKV FVVKKDKSLT AEDIIKHCRV HLTGYKVPKL VEFRDELPKT NVGKILRREL RDEVKRA
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