| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2566 |
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| Symbol | asmA |
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| ID | 1170271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2696117 |
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| End bp | 2697937 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637344397 |
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| Product | asmA protein |
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| Protein accession | NP_718152 |
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| Protein GI | 24374109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTCA TTAAGTGGCT TCTAGTAATT CTGGTGACCT TCGTTGTTGC TGTCACCTTA
TATCTCACCG TTTTTTTTGA CCCTAATGAT TTTAAACCTG AAGTTGTCAA CGCCGTTAAA
AAACAAACTG GGCGTGAGTT AGTGATAACT GAAGACTTGT CATGGACATT TTTTCCAACG
GTAGGGATTA ATTTAGGTGG GGTTTCCCTA TCTAATCCTG AGGGATTTAC GCCTAAGTCG
ATGCTTGAAG TCCATAAAGC GGTCGCTGAA GTTGAACTTA TGCCACTCTT TAGTAAGCAA
ATTGAAATCG TTCAGCTAAG TCTTGATGGT GCAAAAATCA ATTTGGTCAC GCGTAAAAAC
GGTAGCTCAA GCTTCGATGG GTTAACGGGT AGCACGGCTG ACAAATCATC GACACCATCT
GAGCCAAGTC TCTCACAGGC TAAACTGGCC AGTATTGATG TGGGTGGGGT TTCTATTACC
AATACGCAAA TCAATTTAAT TGATGAAGCC AAGGGGCAAA CTCAAACTGT TACCTTAAAG
CAGTTTACTT TGGGGGCGTT TTCACTCGAT AAATTTGCAC CAATTGCCTA TGAGTTGACC
GCATCTTTGC CCGATATGAC ACTGAGCAGT AAAGGCGAAG GTCAAATTAA ATTAAGTCAT
GATTTTAATC AGTTGGTGAT TGAAAAACTG GATATTGCAA CGCAAGTAGA AGGTGACGCC
ATTCCCCATA AAAAATTGAC AGCAGAGGTG AGTGTTAATA GTCAAATCGC GTTAGATAAG
AAACAGTTAT CGGCGGATAT TAATAAGTTT GCGGTGGAAG ATATCAGTGC AACGGGTAAG
CTGGCCGTTC ATTACGCGGG TAAAGTGCCA CAAATTAATG CGAATCTACA ACTGGGCGAT
ATTGATCTTG ATGCCTTGCT GCCAAAATCC GATACGGCAG AAAAACAACC CATTGCATCT
ACTTCATCCC AAGCCATTGA ACCCGATTTA ACGGCGCTTA ATGGTTTGGA TGCGAGGTTA
ACATTGGCGG TTAAATCCAT CAAAGTCGCG AATTTGTCTA CGCAAAACTG GTTGATGGAT
TTAGGCATTA AAAACGGTGT GGTTGATCTT AAGCAGCTCA CAGCGGATCT CTATCAAGGT
AAGTTGATGC TCAATGCTCA GGTAGATGCT CGCTCAAAAG TAGCTAGTTA TCAATTCGAT
AAGCAAATTT CAGCTGTACA AATCCAACCT TTGCTAAAAG ATGCTGCTGA GCTTGAAATC
TTGGCTGGGA CGGCAAATTT TAGTGTTAAA GGAAAAGGTA AGAGTTTAAT TCCTGAACAA
TTAAAGAAAA ATCTCCTCGC CAATGGCCGT TTTGAGATTA CCGATGGCGC CCTTTACGGC
GTAAATATTC CGCAAATGAT CCGTAGTGCT CAGGCAAAAT TAAAGGGGGA TATGTCAGCT
GAAACCCAAG AGGAGCGTAA AACTGACTTC TCAAGTCTGA CAGGTAACTT CTCCCTTGAA
CATGGCGTTG CGGCAAATCC AGATCTAGCC ATGTCATCAC CTTTGATCAG GCTAGCTGGT
AAGGGCAGTG CAAATCTATT GACGGAAACC TTGGATTATC GTTTAACCAC CAGTTTAGTG
AATTCCCTTA AAGGGCAGGG GGGCAGTGGC AAAGATGCCC TTGCGGGAAT TGACATTCCC
CTCGCCATAA CAGGTACTTT CCAAAAGCCT GAATATGCCT TGGATACACA AGCGTTGTTG
AACAATCAGT TGAAGGAAGA GACTGATAAG GCGAAGGAAA AATTAAAGGA TTCGTTACTC
AAAAAGCTGG GCGGCTTTTA G
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| Protein sequence | MTFIKWLLVI LVTFVVAVTL YLTVFFDPND FKPEVVNAVK KQTGRELVIT EDLSWTFFPT
VGINLGGVSL SNPEGFTPKS MLEVHKAVAE VELMPLFSKQ IEIVQLSLDG AKINLVTRKN
GSSSFDGLTG STADKSSTPS EPSLSQAKLA SIDVGGVSIT NTQINLIDEA KGQTQTVTLK
QFTLGAFSLD KFAPIAYELT ASLPDMTLSS KGEGQIKLSH DFNQLVIEKL DIATQVEGDA
IPHKKLTAEV SVNSQIALDK KQLSADINKF AVEDISATGK LAVHYAGKVP QINANLQLGD
IDLDALLPKS DTAEKQPIAS TSSQAIEPDL TALNGLDARL TLAVKSIKVA NLSTQNWLMD
LGIKNGVVDL KQLTADLYQG KLMLNAQVDA RSKVASYQFD KQISAVQIQP LLKDAAELEI
LAGTANFSVK GKGKSLIPEQ LKKNLLANGR FEITDGALYG VNIPQMIRSA QAKLKGDMSA
ETQEERKTDF SSLTGNFSLE HGVAANPDLA MSSPLIRLAG KGSANLLTET LDYRLTTSLV
NSLKGQGGSG KDALAGIDIP LAITGTFQKP EYALDTQALL NNQLKEETDK AKEKLKDSLL
KKLGGF
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