Gene SO_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2490 
Symbol 
ID1170203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2612896 
End bp2613750 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content45% 
IMG OID637344319 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionNP_718077 
Protein GI24374034 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCC TAGAAAAGGT TCAAAAAAGC CTCACCCATT TTAGTAAGTC AGAACGCAAG 
GTTGCAGAGG TCATCTTAGC CTCTCCGCAA ACGGCTATTC ACTCCAGCAT CGCCACTTTA
GCTAAGATGG CAGATGTGAG TGAACCTACT GTAAACCGTT TCTGTCGCCG CTTAGATACT
AAAGGCTTTC CTGATTTTAA GTTACATCTG GCACAAAGTC TCGCAAACGG CACACCTTAT
GTGAGCCGCC ATGTCGAAGA AGATGATTCA CCAGAGTCAT ATACAACAAA AATATTCGAA
TCCTCAATGG CTTCCTTAGA TACCGCTCGT CAAAGTTTAG ATGTTGCCGC CATTAATAAA
GCCGTTGATA TTCTGACTCA GGCCAAGACA ATTTCCTTCT TTGGCTTAGG GGCATCAGCC
TCAGTTGCCC ATGACGCGCA AAATAAATTT TTCCGTTTTA ATGTGCCTGT CATCTGTTTT
GACGATGTTC TGATGCAACG CATGAGCTGT ATCAACAGCA ATGAAGGCGA TGTAGTGGTA
TTAATTTCCC ACACTGGCCG CACTAAGTCT TTGATTGAAA TAGCACGTTT AGCAAGAGAA
AACGGCGCCG CCGTAATTGG TATCACGGCA CGCAACTCGC CGTTATCGAT GGAATGTACC
CTGCCCGTCA CCATGGAAGT GCCTGAGGAT ACGGATATGT ATTTACCAAT GGCCTCGCGT
TTAGCGCAAT TGGTGACTAT AGATGTATTG GCGACTGGTT TTACGCTACG CCGCGGCCCA
CGTTTCCGTG ATAATTTAAA ACGTGTAAAA GAAGTGTTGA AAGAGTCTCG TATCAATAAA
GATCCGATAC TGTAA
 
Protein sequence
MNTLEKVQKS LTHFSKSERK VAEVILASPQ TAIHSSIATL AKMADVSEPT VNRFCRRLDT 
KGFPDFKLHL AQSLANGTPY VSRHVEEDDS PESYTTKIFE SSMASLDTAR QSLDVAAINK
AVDILTQAKT ISFFGLGASA SVAHDAQNKF FRFNVPVICF DDVLMQRMSC INSNEGDVVV
LISHTGRTKS LIEIARLARE NGAAVIGITA RNSPLSMECT LPVTMEVPED TDMYLPMASR
LAQLVTIDVL ATGFTLRRGP RFRDNLKRVK EVLKESRINK DPIL