| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2478 |
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| Symbol | kdsB |
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| ID | 1170191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2599356 |
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| End bp | 2600093 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344307 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | NP_718065 |
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| Protein GI | 24374022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTCA CTCTGTTAAT CCCGGCGCGT TACGGTTCTA GCCGCTTCCC GGGCAAACCT
TTAGCCCCGA TTAACGGCAA GCCGATGATC CAACACGTGT ACGAACGCGC GTCGTTAGCC
AAAGGCCTCA CCAATATTTA TGTTGCAACC GATGATGAGC GTATTAAAAG CGCCGTTGAA
GGTTTCGGTG GCAAAGTGGT AATGACTAGC CCAGATGCGG CATCGGGCAC AGATCGTATT
AACGATGCAA TCAATCAATT AGGACTGAAG GATGATGATT TAGTCATTAA CCTTCAAGGC
GACCAACCTC TTATCGACCC AACCTCCATC GAGCAAGTGA TCAGCCTATT CGAACGTCAC
CCTGGCGAGT TTGAAATGGC GACCCTCGGC TATGAAATTG TCAACAAAGC TGAACTTGAC
GATCCTATGC ATGTGAAGAT GGTCTTCGAT AACGACTACT ATGCGCTCTA CTTCTCCCGC
GCGCGTATTC CCTTTGGTCG CGATACTAAA GATTATCCGG TTTACAAACA CTTAGGTGTT
TATGCTTATA CCCGCAGATT TGTGCAAGCC TTTGCAGCCC TGCCATTAGG CCGCCTTGAA
GATCTGGAAA AGTTAGAACA ACTGCGCGCC CTAGAATACG GCCATAAAAT CAAGGTCGCT
ATCAGTGCCT TCGACTCTAT CGAAGTTGAC ACCCCGGAAG ATATTCGTAA GTGTGAACAA
CGTTTAGCCG TTGATTAA
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| Protein sequence | MNVTLLIPAR YGSSRFPGKP LAPINGKPMI QHVYERASLA KGLTNIYVAT DDERIKSAVE
GFGGKVVMTS PDAASGTDRI NDAINQLGLK DDDLVINLQG DQPLIDPTSI EQVISLFERH
PGEFEMATLG YEIVNKAELD DPMHVKMVFD NDYYALYFSR ARIPFGRDTK DYPVYKHLGV
YAYTRRFVQA FAALPLGRLE DLEKLEQLRA LEYGHKIKVA ISAFDSIEVD TPEDIRKCEQ
RLAVD
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