Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2411 |
Symbol | gyrA |
ID | 1170127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2515879 |
End bp | 2518638 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637344245 |
Product | DNA gyrase, A subunit |
Protein accession | NP_718001 |
Protein GI | 24373958 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATC TGGCATCATC TATTTCGCCA ATTAATATCG AAGACGAACT AAAGAATTCG TACCTTGATT ACGCCATGAG CGTCATCGTG GGACGTGCAT TACCAGACGT GCGTGATGGC CTTAAGCCTG TGCATCGCCG CGTGCTGTTT GCCATGAGTG AATTGAAGAA CGATTGGAAC AAGCCGTACA AAAAGTCTGC CCGTGTGGTC GGTGACGTGA TCGGTAAATA TCACCCCCAT GGTGACTCGG CGGTATACGA TACTATCGTA CGTATGGCTC AGCCTTTCTC ACTGCGTTAC ACCTTAGTCG ATGGTCAAGG AAACTTCGGT TCGGTTGACG GTGACTCAGC AGCGGCAATG CGTTACACCG AAATCCGTAT GGATAAGTTA GCGCACCAGC TCCTCGCCGA TCTTGAAAAA GAAACCGTTG ACTATGTGCC AAACTACGAC GGCACCGAAC AAATTCCTGC GGTATTACCG ACACGCGTCC CTAACCTGTT GATTAACGGT TCATCGGGTA TTGCAGTTGG TATGGCAACG AACATCCCAC CGCACAACTT AACCGAAGTG GTTAAAGGCT GTTTAGCGCT GATCGCTGAT CCTGCGTTGT CGATTGAACA GCTGATGGAC TATATTCCAG GCCCCGATTT CCCAACTGCA GCGATTATCA ATGGCCGTAA GGGCATTATT GATGCCTATA AAACCGGCCG TGGCCGTGCC ATCATGCGTG CACTGGCTGA GGTGGAAACG GAAGAGAATG GCCGTGAACG CATTATCGTC ACTGAAATCC CGTATCAAGT AAACAAAGCC CGTTTAATTG AGAAGATTGC CGAGCTGGTT AAAGATAAAA AGCTTGAAGG CATTAGCGGT CTGCGCGACG AGTCTGACAA AGACGGTATG CGCATCGTTA TTGAAATTAA ACGCGGTGAA GTGGGTGAAG TTGTCCTAAA CAACCTCTAT GCTCAAACGC AAATGCAGTG CTCTTTTGGT ATCAACATGG TGGCGTTGAC TAATGGTCAG CCGAAGTTGT TCAACTTAAA AGAAATGCTC GAGTGCTTTA TTCTGCACCG CCGTGAAGTG GTAACACGCC GCACCGTATT TGAACTGCGT AAAGCGCGCG AGCGCGCCCA TATCCTTGAG GCATTAGCGG TCGCACTGGC CAACATCGAT CCGATTATTG CGCTGATCAA AGCCTCGCCA ACTCCAGCTG ACGCTAAAGT TAAATTGGTT GAACAGGGCT GGGCGCTCGG TCATGTGCAA GGCATGCTTG AAAAAGCCGG TGACGATGCA GCACGTCCTG AGTGGTTAGA GCCAGAATAT GGTATCCGCG ATGGCTTATA TTATCTGACT GAGCAACAGG CTCAGGCGAT CCTTGAGCTG CGCTTACACC GTTTAACTGG GCTTGAGCAC GATAAGATCA TCGCTGAATA CGAAGAGCTG CTCGAGTTTA TCGCAGGTCT GCTGTTTATT TTGCGCAGCC CTGAGCGTTT AATGGAAGTG ATCAAAGAAG AGTTGGAAGA AATTCTAGCT GAATACGGCG ATGCCCGCCG CACAGTGATT AACGCCAACG AAATTGATAT GAGTCTTGAA GACTTAATCA ACGAAGAAGA CGTGGTAGTA ACCTTGTCAC ACTTAGGTTA TGCCAAGTAT CAACCACTGA GCGATTATCA AGCTCAGCGC CGTGGTGGTA AAGGCAAAGT TGCAACGAAA GTGAAAGATG AAGATTTCGT TGAAAAACTG CTGGTTGCCA ATACCCACGA CACCATTTTG TGCTTCTCTG ACTTCGGTAA GATGTACTGG CTCAAAGTCT ATCAATTACC GCTGGCGAGC CGCACTTCCC GTGGTCGTCC AATTGTTAAC CTGCTGCCGC TGGCTGATGG CGAGCGCATT ACTGCGATTC TACCGGTACG CGAATACGCC GAAGATAAAT ACATCATCAT GGCAACCTCT AACGGTACCG TGAAGAAAAC TGCATTGACG GCCTACAGCA ACCCACGTGC AAACGGTATT ATCGCTGTTA ACCTCAAAGA CGGTGACCAA CTGATCGGTG TCGATATCAC CAATGGTGAT GATGAGATCA TGCTGTTCTC GAATGAAGGT AAAGTGGTTC GCTTTAAAGA AGGCGAAGAA GTGGCCGTCC TCGATGAAAA CGGCAACCCA GTGCTAGATG AAGAAGGCAA CCCACAGATT AACTTCAAGG GCGTGCGTCC AATGGGTCGT GGCGCGACGG GTGTTCGTGG TATCAAGCTT GAAGAAGGTC AAAGAGTGGT GTCTCTTATC GTGCCTAAGG ACGATGGCGC TATCTTAACT GTGACCGAAA ACGGCTATGG TAAACGTACT GAGCTGTCTG AATATCCATC GAAGAGCCGC GCGACGAAAG GTGTGGTATC GATCAAGGTG AGCGAACGTA ACGGTGCTGT CGTTGGTGCG GTACAAGTGG GCGGCAATGA CGAAATCATG CTGATCAGCG ACAAGGGCAC TTTAGTGCGT ACGCCAGCTA ATGGTGTGTC TATCATTGGC CGTAACACAC AAGGCGTGAC CATTATTCGT ACCGCAAGTG ACGAGAAAGT GGTTGGTCTG CAACGTATCG ATGAGATCCA AGGCGACGAA GATGAAGTCG AGCTGGATGA AAACGGTATG CCAATCGCCC CAGTTATCGC TGAAGGTGAC TCTGTTCAAG AAGAGCCTTT AGAGGAAGAG GATGAGCTGG AAGAATTAGA CGAAGACGAA GAGCTTGACG ACGAGCAAGA CGAAGACTAA
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Protein sequence | MTDLASSISP INIEDELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMSELKNDWN KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY TLVDGQGNFG SVDGDSAAAM RYTEIRMDKL AHQLLADLEK ETVDYVPNYD GTEQIPAVLP TRVPNLLING SSGIAVGMAT NIPPHNLTEV VKGCLALIAD PALSIEQLMD YIPGPDFPTA AIINGRKGII DAYKTGRGRA IMRALAEVET EENGRERIIV TEIPYQVNKA RLIEKIAELV KDKKLEGISG LRDESDKDGM RIVIEIKRGE VGEVVLNNLY AQTQMQCSFG INMVALTNGQ PKLFNLKEML ECFILHRREV VTRRTVFELR KARERAHILE ALAVALANID PIIALIKASP TPADAKVKLV EQGWALGHVQ GMLEKAGDDA ARPEWLEPEY GIRDGLYYLT EQQAQAILEL RLHRLTGLEH DKIIAEYEEL LEFIAGLLFI LRSPERLMEV IKEELEEILA EYGDARRTVI NANEIDMSLE DLINEEDVVV TLSHLGYAKY QPLSDYQAQR RGGKGKVATK VKDEDFVEKL LVANTHDTIL CFSDFGKMYW LKVYQLPLAS RTSRGRPIVN LLPLADGERI TAILPVREYA EDKYIIMATS NGTVKKTALT AYSNPRANGI IAVNLKDGDQ LIGVDITNGD DEIMLFSNEG KVVRFKEGEE VAVLDENGNP VLDEEGNPQI NFKGVRPMGR GATGVRGIKL EEGQRVVSLI VPKDDGAILT VTENGYGKRT ELSEYPSKSR ATKGVVSIKV SERNGAVVGA VQVGGNDEIM LISDKGTLVR TPANGVSIIG RNTQGVTIIR TASDEKVVGL QRIDEIQGDE DEVELDENGM PIAPVIAEGD SVQEEPLEEE DELEELDEDE ELDDEQDED
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