Gene SO_2363 details

Gene Information

• Locus tag: SO_2363
• Symbol: ccoO
• ID: 1170084
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2469421
• End bp: 2470047
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637344201
• Product: cbb3-type cytochrome c oxidase subunit II
• Protein accession: NP_717953
• Protein GI: 24373910
• COG category: [C] Energy production and conversion
• COG ID: [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit
• TIGRFAM ID: [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTA ATCATGAGAT AGTTGAAAAA AACATCGGTT TGTTAGCGAT CTTCACGGTT 
ATCGCTATCA GCTTCGGTAG CTTGGTTGAA ATCACTCCGC TGATTTTCCA AAAAGATACC 
ACTGAGCCAG TTGAAGGTTT GAAACCTTAT ACAGCCCTGC AGCTTGAAGG TCGTGATATC 
TATGTTCGTG AAGGTTGTTA CAACTGTCAC AGTCAGATGA TCCGTCCTCT GCGTGCAGAG 
ACTGAACGTT ACGGTCACTA TTCCGTTGCT GGAGAATCTG TTTGGGATCA CCCATTCCAA 
TGGGGTTCTA AGCGTACAGG TCCTGATTTG GCGCGTGTTG GCGGTCGTTA TAGCGATAAA 
TGGCATGAAG TTCACTTAAT CGATCCTCGT GCAGTAGTTC CTCAATCGAA TATGCCAGCC 
TTCCCATGGC TTGCCGAAAA CAAGTTAGAC GGCAAGTTGA CCGGCGATAA GATGACTATT 
CTACGTAACA TGCATAAAGG CGGTTACAAG GGTAATGATC TTTACACTGA TGAAGAAATC 
GCAGGCGCTC AAAAAGCCGT TGAAGGTAAA ACTGAGATGG AAGCTTTGAT CGCGTATCTT 
CAGTCTTTGG GTCACGCACT CAAATAA 

 

Protein sequence

MKFNHEIVEK NIGLLAIFTV IAISFGSLVE ITPLIFQKDT TEPVEGLKPY TALQLEGRDI 
YVREGCYNCH SQMIRPLRAE TERYGHYSVA GESVWDHPFQ WGSKRTGPDL ARVGGRYSDK 
WHEVHLIDPR AVVPQSNMPA FPWLAENKLD GKLTGDKMTI LRNMHKGGYK GNDLYTDEEI 
AGAQKAVEGK TEMEALIAYL QSLGHALK