Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2340 |
Symbol | |
ID | 1170063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2447554 |
End bp | 2448531 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637344177 |
Product | alpha keto acid dehydrogenase complex, E1 component, beta subunit |
Protein accession | NP_717930 |
Protein GI | 24373887 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAGAAA TGAATATGTT ACAGGCCGTC AATGAGGCCT TGTCGATTGC AATGCAAGCC GATGAACGCA TGGTGGTGTT TGGTGAAGAC GTCGGCCATT TTGGCGGCGT GTTTCGCGCC ACCTCTGGTC TTCAAGAAAA ATTCGGTCGC GCTCGCTGCT TTAACACGCC ATTGACTGAG CAAGGTATTG CGGGTTTTGC CAACGGGTTA GCCTCCAATG GTATGACCGC CGTGGCGGAA ATCCAGTTTG CTGATTACAT CTTCCCAGCG TTTGATCAGA TTGTAAACGA GTCGGCTAAA TTCCGTTACC GCAGCGGTAA TGAGTTTAAT GTGGGAAGCC TTGTGTTCCG CACGCCCTAT GGTGGCGGTA TTGCAGGTGG TCACTATCAC TCACAATCGC CAGAAGCCTA CTTTACCCAA ACCCCTGGCT TAAAAGTGGT TGTGCCGCGT AATCCTGCGC AGGCCAAAGG GTTATTGCTT GCTTCGATTC GTGATAAAAA CCCAGTGGTG TTCTTCGAGC CTAAGCGTTT ATACCGCGCC TCTGTGGGTG ACGTGCCCGC TGGCGATTAT GAAATTGAGC TAGGTAAAGC CGAGGTGTTA CGCGAAGGTA AGGACATCAC GTTAGTGGCG TGGGGCGCGC AGATGGAAAT CATCGAGAAA GCGGCCGATA TGGCGGCTAA AGAGGGCATT TCCTGCGAAA TTATTGACCT ACGTACACTC GCACCATGGG ATGTGAATAC AGTTGCGGAT TCAGTGAAGA AAACGGGGCG ACTGCTCGTT AACCACGAAG CGCCATTAAC CGGTGGATTT GCTGGTGAAA TTGCGGCGAC GATCCAACAG GAGTGCTTCT TGTATTTAGA ATCACCCATC AGCCGTGTAT GTGGTTTAGA TACGCCATAT CCACTGGTTC ACGAAAAAGA ATATATGCCC GATGCGCTCA AAACATTTGA AGCCATCAAA GCATCAGTGA ACTTCTAG
|
Protein sequence | MAEMNMLQAV NEALSIAMQA DERMVVFGED VGHFGGVFRA TSGLQEKFGR ARCFNTPLTE QGIAGFANGL ASNGMTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFN VGSLVFRTPY GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPAQAKGLLL ASIRDKNPVV FFEPKRLYRA SVGDVPAGDY EIELGKAEVL REGKDITLVA WGAQMEIIEK AADMAAKEGI SCEIIDLRTL APWDVNTVAD SVKKTGRLLV NHEAPLTGGF AGEIAATIQQ ECFLYLESPI SRVCGLDTPY PLVHEKEYMP DALKTFEAIK ASVNF
|
| |