Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2328 |
Symbol | efp |
ID | 1170052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2437896 |
End bp | 2438456 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637344166 |
Product | elongation factor P |
Protein accession | NP_717918 |
Protein GI | 24373875 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTG CTCATGAAGT CCGTCCAGGT AACGTGATCA TGTTTGAAGG CAGCCCATGG GTTGTACAGA AAACAGAAAC AACTCGTTCT GGCCGTAACG CTGCTATCGT TAAGTTAAAG TTGAAAAACT TGCTGCTTAA CTCTGGCACC GAAACCACTT TCAAAGGTGA AGATAAGATT GACGATATTA TCCTAGATCG TCTGGATTGT ACTTATTCTT ACTTTGCTGA TCCTATGTAC GTGTTCATGG ATGCAGAATA CAACCAATAC GACGTAGAAG CTGAAAACTT AGGTGATGCA GCGGCTTACA TCGTTGACGG TATGGAAGAA ACTTGCCAAG TAACTTTCTA CGATGGCAAA GCAATTTCTG TTGAAATGCC AACGACTATT GTACGTGAAG TGATCTACAC TGAGCCGTCT GCTCGTGGCG ATACTTCAGG TAAAGTGATG AAGCCTGCAA CTATCACCGG CGGCGGCACC ATCAGCGTGG CTGACTTTGT TAAAGTTGGC GACAAGATCG AAATCGATAC TCGTACTGGC GAATTCAAAA AGCGCGTTTA A
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Protein sequence | MKTAHEVRPG NVIMFEGSPW VVQKTETTRS GRNAAIVKLK LKNLLLNSGT ETTFKGEDKI DDIILDRLDC TYSYFADPMY VFMDAEYNQY DVEAENLGDA AAYIVDGMEE TCQVTFYDGK AISVEMPTTI VREVIYTEPS ARGDTSGKVM KPATITGGGT ISVADFVKVG DKIEIDTRTG EFKKRV
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