Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2310 |
Symbol | serS |
ID | 1170035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2422244 |
End bp | 2423530 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637344153 |
Product | seryl-tRNA synthetase |
Protein accession | NP_717905 |
Protein GI | 24373862 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATC CTAAATTTTT GCGCAACGAA TTAGCCGTGA CCGCTGAGCG ATTAGCTACC CGTGGTTTTA TTTTAGATGT CGCTCATCTC ACTCAATTAG AAGAAAAACG TAAGTCACTG CAAGTGGCGA CAGAAGAGCT GCAAGCTTCG CGTAATGCTA TTTCCAAGTC CATTGGACAA GCTAAAGCAC GTGGTGAAGA TGTTGATGCC ATAATGGCGC AGGTCGGTGA TTTAGGGGCG CAACTCGATG CGAAAAAAGT CGAGCTTGCC GCAGTACTTG AAGAAGTTAA CGCGATTGCC ATGTCGATGC CAAACCTGCC GGATGAGTCT GCGCCAATCG GGGCCGATGA AACTGAAAAC GTTGAAGTCC GCCGTTGGGG TTCGCCACGC AGTTTTGATT TTCCAATTAA AGATCATATC GATTTAGGCG AAGGCCTAAA CGGCTTAGAT TTTAAAAGCG CGGTTAAAAT CACGGGATCT CGTTTTATCG TAATGAAAGG CCAAATTGCT CGTTTAAACC GCGCATTAGG TCAGTTCATG TTAGATCTGC ACACCACCGA ACATGGTTAT ACTGAAGCCT ATGTGCCATT ACTCGTTAAT GAGGCTAGCT TATTGGGCAC AGGTCAATTA CCCAAGTTTG GTGAAGATTT GTTCCACACC AAACCTGCGA CCGAAGAAGG CCAAGGCTTA AGCCTTATTC CAACCGCAGA AGTGCCATTA ACTAACTTAG TACGTGATAG CATCGTTGAT GAAGATGAGT TACCGATTAA GTTAACTGCG CATACGGCGT GTTTCCGCAG CGAAGCGGGC TCATATGGTA AAGATACCCG TGGTCTTATC CGTCAGCACC AATTTGATAA AGTGGAATTA GTACAGTTGG TTAAGCCAGA AGATTCAATG GCTGCACTCG AAGTGTTGAC GGGTCATGCT GAAACAGTAC TGCAACGCTT AGGTTTACCT TATCGCACCG TCGTGCTTTG CACTGGTGAC ATGGGCTTTG GCTCAAGCAA GACCTACGAT ATTGAAGTGT GGTTACCTGG TCAAAACACT TACCGTGAGA TCTCTTCATG CTCAAATATG AAGGATTTCC AAGCGCGTCG TATGCAAGCG CGCTACCGAG TGAAGGCCGA TAACAAGCCT GTGTTGCTTC ACACCTTAAA TGGCTCAGGC CTCGCGGTGG GACGTACTTT AGTGGCAATT TTAGAAAACT ATCAAAATGC CGATGGTAGC GTGACTGTTC CTGAGGCGCT ACGTCCTTAT ATGGGCGGAT TAACTCAGAT CGGTTAA
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Protein sequence | MLDPKFLRNE LAVTAERLAT RGFILDVAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ AKARGEDVDA IMAQVGDLGA QLDAKKVELA AVLEEVNAIA MSMPNLPDES APIGADETEN VEVRRWGSPR SFDFPIKDHI DLGEGLNGLD FKSAVKITGS RFIVMKGQIA RLNRALGQFM LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEL VQLVKPEDSM AALEVLTGHA ETVLQRLGLP YRTVVLCTGD MGFGSSKTYD IEVWLPGQNT YREISSCSNM KDFQARRMQA RYRVKADNKP VLLHTLNGSG LAVGRTLVAI LENYQNADGS VTVPEALRPY MGGLTQIG
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