Gene SO_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2310 
SymbolserS 
ID1170035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2422244 
End bp2423530 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content47% 
IMG OID637344153 
Productseryl-tRNA synthetase 
Protein accessionNP_717905 
Protein GI24373862 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATC CTAAATTTTT GCGCAACGAA TTAGCCGTGA CCGCTGAGCG ATTAGCTACC 
CGTGGTTTTA TTTTAGATGT CGCTCATCTC ACTCAATTAG AAGAAAAACG TAAGTCACTG
CAAGTGGCGA CAGAAGAGCT GCAAGCTTCG CGTAATGCTA TTTCCAAGTC CATTGGACAA
GCTAAAGCAC GTGGTGAAGA TGTTGATGCC ATAATGGCGC AGGTCGGTGA TTTAGGGGCG
CAACTCGATG CGAAAAAAGT CGAGCTTGCC GCAGTACTTG AAGAAGTTAA CGCGATTGCC
ATGTCGATGC CAAACCTGCC GGATGAGTCT GCGCCAATCG GGGCCGATGA AACTGAAAAC
GTTGAAGTCC GCCGTTGGGG TTCGCCACGC AGTTTTGATT TTCCAATTAA AGATCATATC
GATTTAGGCG AAGGCCTAAA CGGCTTAGAT TTTAAAAGCG CGGTTAAAAT CACGGGATCT
CGTTTTATCG TAATGAAAGG CCAAATTGCT CGTTTAAACC GCGCATTAGG TCAGTTCATG
TTAGATCTGC ACACCACCGA ACATGGTTAT ACTGAAGCCT ATGTGCCATT ACTCGTTAAT
GAGGCTAGCT TATTGGGCAC AGGTCAATTA CCCAAGTTTG GTGAAGATTT GTTCCACACC
AAACCTGCGA CCGAAGAAGG CCAAGGCTTA AGCCTTATTC CAACCGCAGA AGTGCCATTA
ACTAACTTAG TACGTGATAG CATCGTTGAT GAAGATGAGT TACCGATTAA GTTAACTGCG
CATACGGCGT GTTTCCGCAG CGAAGCGGGC TCATATGGTA AAGATACCCG TGGTCTTATC
CGTCAGCACC AATTTGATAA AGTGGAATTA GTACAGTTGG TTAAGCCAGA AGATTCAATG
GCTGCACTCG AAGTGTTGAC GGGTCATGCT GAAACAGTAC TGCAACGCTT AGGTTTACCT
TATCGCACCG TCGTGCTTTG CACTGGTGAC ATGGGCTTTG GCTCAAGCAA GACCTACGAT
ATTGAAGTGT GGTTACCTGG TCAAAACACT TACCGTGAGA TCTCTTCATG CTCAAATATG
AAGGATTTCC AAGCGCGTCG TATGCAAGCG CGCTACCGAG TGAAGGCCGA TAACAAGCCT
GTGTTGCTTC ACACCTTAAA TGGCTCAGGC CTCGCGGTGG GACGTACTTT AGTGGCAATT
TTAGAAAACT ATCAAAATGC CGATGGTAGC GTGACTGTTC CTGAGGCGCT ACGTCCTTAT
ATGGGCGGAT TAACTCAGAT CGGTTAA
 
Protein sequence
MLDPKFLRNE LAVTAERLAT RGFILDVAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ 
AKARGEDVDA IMAQVGDLGA QLDAKKVELA AVLEEVNAIA MSMPNLPDES APIGADETEN
VEVRRWGSPR SFDFPIKDHI DLGEGLNGLD FKSAVKITGS RFIVMKGQIA RLNRALGQFM
LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEL VQLVKPEDSM
AALEVLTGHA ETVLQRLGLP YRTVVLCTGD MGFGSSKTYD IEVWLPGQNT YREISSCSNM
KDFQARRMQA RYRVKADNKP VLLHTLNGSG LAVGRTLVAI LENYQNADGS VTVPEALRPY
MGGLTQIG