Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2204 |
Symbol | |
ID | 1169941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2318090 |
End bp | 2319025 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344060 |
Product | DNA ligase |
Protein accession | NP_717802 |
Protein GI | 24373759 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTAT TGAGAGGCAA AGGAATGGCT CTTACAACTC GCTTACCTTT TGTAAGATTT ACAGCGCTTA AGTGCTTGGG ATTGATTATT GGACTCTGCT GCGTATTGAT TACCGCAAGC TTTGCGAGTC CGGCACCGAA TATTCAATTA GCAACGGAAT ATTCGCTCGA TAATCACTCC AATAATGATG CTCAAATCAG CACATTTTTT GTCAGCGAAA AACTCGATGG TGTACGAGGT TATTGGGATG GGCAACGCTT ATTCACCCGT CAGGGCAATC CCATTTTGGC CCCGAGTTGG TTTACCGCCG AGTTTCCTGC CATCGCAATG GATGGTGAGT TATGGCTTGG AAGAGGGCAG TTTGAGGCGA TATCAGGCTT AATACGTCAA GCATCGCCAA AGGATGCCGA CTGGCAAAAC GTTCGGTTTA TGGTATTTGA TTTACCAACA ACCAAAGGCA GCTTTGAAGA GCGTTACCAT AAGATGCAAG CACTTATCGC AGGGAAATCG GTTTATCTGC AAGTGATTGA GCAGTTTAGT GTCGCCAGTG TTGAAGCCCT GTATCAAACC TTAGATACCT TAGTTGCCCT TGGCGCTGAA GGGCTAATCT TACATCGTCG TACGGCAATC TATACGCCGG GGCGTAACCC TAATGTGATG AAATTAAAGC CCTATTTAGA TGCAGAAGCC ACAGTGATTG GTTACATTGC AGGCAAAGGG CAATTTAGTG GAAAGATGGG GGCCTTAAGG GTACAAACGC CAGATGGTCG TATCTTTAAT ATTGGCACAG GCTTTAACCT CGCTGAGCGC CAGCATCCCC CAGCCATTGG TACGCTTATC ACCTACAAGT ATCTTGGCTT AACGGTGAAT GGTTTACCGC GTTTTGCCAG TTACTTACGG ATCAGAACCG ATATTGACCC AAAGAATAAA GAATAA
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Protein sequence | MTLLRGKGMA LTTRLPFVRF TALKCLGLII GLCCVLITAS FASPAPNIQL ATEYSLDNHS NNDAQISTFF VSEKLDGVRG YWDGQRLFTR QGNPILAPSW FTAEFPAIAM DGELWLGRGQ FEAISGLIRQ ASPKDADWQN VRFMVFDLPT TKGSFEERYH KMQALIAGKS VYLQVIEQFS VASVEALYQT LDTLVALGAE GLILHRRTAI YTPGRNPNVM KLKPYLDAEA TVIGYIAGKG QFSGKMGALR VQTPDGRIFN IGTGFNLAER QHPPAIGTLI TYKYLGLTVN GLPRFASYLR IRTDIDPKNK E
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