| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2197 |
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| Symbol | |
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| ID | 1169934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2310820 |
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| End bp | 2311845 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637344053 |
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| Product | GGDEF family protein |
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| Protein accession | NP_717795 |
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| Protein GI | 24373752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGAG ATTTATTACA AACCGCTGCC TTGAATCTTA AAAAAGCGGT TCCCTTAATG
CTCAAACATC AGATCCCCAC GACTCCCATT AATTATGCCC TTTGGTATAC CTATGTGGGT
GAACAAAATC TGGCATTAAA TGCACAGCTC GATACCGTTA TCGCACATTA CAATACTTGC
CCACCCGTGA GCAGTGAGCT GTTGTATCGC CAATATGTGG CCGATCCCGT TGAACTTAAT
GTGCGCGATA TGCGCCTCAA TCTCGAGGCG ATGGCCACAG AGTTATCGCA ATCGATTAAG
GACACTAGCC TTGATACAAC CGAGTTTCAA ACCTGTATCA ATAGCAATTT TTCCAAACTT
AATGGCATAG AAGAAGGTGC TCTCAGTGTC GAGCAAGTGC TAGATTTAGT TCGCAATTTA
GTGAAGGAGT CTGACAATAT TCGTTCGAGC ACTGAGTTTT TGACCACACA GTTGCAAAAA
GCCCAGACAG AGATCGATGC GCTAAAACAA AAGCTCGAAA AAACAGAAAA AGATGTGCTT
TATGATGCCC TTACAGGCTG TTTAAACCGC CGCGCCTTTG ATGCAGATAT CGCTGGCATG
ATAGCGCAGG CTCCGGAAGG GACCTGCCTA ATCTTAGTCG ATATCGATCA TTTTAAAGCC
TTTAATGATA ACTATGGCCA CCAACTGGGC GATCAAGTCC TAAAGGCTGT GGCCAAACGC
CTACAGGAAG CATGCCGAGA TGGCAGCAAA CTATATCGTT TTGGCGGTGA AGAATTTGCG
ATTATCGTGC CCAAGAGCCA ACTGCGGATC ACAAGGCAAT TGGCTGAGGC TATGCGCCGC
GGGCTTGAAA AACTGTGCCT AAAAGACCGA CGTAAAGACC AACTTGTTGA TAATATTACC
GCTTCTTTTG GTGTTGCCCA ATGGCAAGAA AGGCAATCTG TTGTGCAGCT GATAGAGAAA
ACAGATAAGC TGCTTTACGA AGCTAAACGC CTAGGCCGTA ATCGGGTTAT GCCGATAAAC
AACTAA
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| Protein sequence | MSRDLLQTAA LNLKKAVPLM LKHQIPTTPI NYALWYTYVG EQNLALNAQL DTVIAHYNTC
PPVSSELLYR QYVADPVELN VRDMRLNLEA MATELSQSIK DTSLDTTEFQ TCINSNFSKL
NGIEEGALSV EQVLDLVRNL VKESDNIRSS TEFLTTQLQK AQTEIDALKQ KLEKTEKDVL
YDALTGCLNR RAFDADIAGM IAQAPEGTCL ILVDIDHFKA FNDNYGHQLG DQVLKAVAKR
LQEACRDGSK LYRFGGEEFA IIVPKSQLRI TRQLAEAMRR GLEKLCLKDR RKDQLVDNIT
ASFGVAQWQE RQSVVQLIEK TDKLLYEAKR LGRNRVMPIN N
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