Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2191 |
Symbol | metC |
ID | 1169928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2302113 |
End bp | 2303312 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637344047 |
Product | cystathionine beta-lyase |
Protein accession | NP_717789 |
Protein GI | 24373746 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AACATCAGCT CGCCACCCAA ATCGTCAGCG TCGGTCGCGA TAAAAAATGG ACCAAGGGCG TGATTAATCC GCCCGTATTT CGCGCATCGA CCATAGTGTT CGACACGATG GAGGATATGC GTCATGCCGC CAAAAACAAA ACCAATGGCG AAATGTTTTA CGGCCGCCGC GGCACCCCGA CCCACTTTGC GTTTCAAGCG GCGGTAAGCG AACTCGAAGG TGGCGCTGGC ACAGCACTGT ATCCCTCTGG CGCGGCAGCG ATTAGCGCGG CTTTGTTATC GTTTTTACAG GCGGGCGATC ATCTGCTGAT GGTCGATAGC GTTTACGAGC CAACACGCGA TTTTTGCAGC CATATTCTGG CAGGCTTTAA TATTGAGACC ACCTATTACG ATCCCCTGAT TGGTGAAGGC ATTCGCGCGC TTATCCGCCC CAATACTAAG GTATTGTTTT TAGAGTCTCC CGGCTCCATC ACCATGGAAG TGCAAGACGT CCCAACCCTA TGCCGCATCG CCCATGAACA TGGATTGGTG ACCATTCTCG ACAACACATG GGCCTCGCCA ATCAATAGCA AGCCCTTCGA GATGGGTGTC GATGTGTCGA TTCAAGCCGC CACAAAGTAT ATTGTCGGCC ACTCGGATGT GATGATAGGC ACGGCGACCG CCAACGAGCA ATACTGGCCG CAGCTGCGTG AGCGCAGTTA TTTACTGGGG CAAACCACTT CCCCCGATGA TGTGTATCTC GCCACGCGCG GATTACGCAC CTTAGGCGTG CGCATGGCGC AACATGAGAA AAATGCCCTA AAAGTAGCTA ACTGGTTACA AACCCGTCCT GAAGTAGACC ATTTACGTCA TCCCGCCTTT GAGACCTGCC CAGGACATGA ATTCTTTAAA CGCGACTTTA GCGCATCAAA TGGTTTGTTT TCCTTTGTAT TAAAACAAGG CGATCAGGAA GCGGTTACCG CACTCGTTGA AAATATGCAG CACTTTAAAA TGGGCTTTTC TTGGGGTGGT TATGAGAGTC TGATCTTAGG GATTTTTGGC ATTGAAAGAA TCCGTAGTGC GACCAAGTGG GATGCTAGCA AACCGTTGAT CCGTGTTCAT ATTGGTCTTG AAGATCCCGA GGATTTAATT GCCGATCTCA GCGCAGGATT CGAGCGTTTT AATGCCGTGC TCGCCGCTAA GGTCAAATAA
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Protein sequence | MTDKHQLATQ IVSVGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR GTPTHFAFQA AVSELEGGAG TALYPSGAAA ISAALLSFLQ AGDHLLMVDS VYEPTRDFCS HILAGFNIET TYYDPLIGEG IRALIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV TILDNTWASP INSKPFEMGV DVSIQAATKY IVGHSDVMIG TATANEQYWP QLRERSYLLG QTTSPDDVYL ATRGLRTLGV RMAQHEKNAL KVANWLQTRP EVDHLRHPAF ETCPGHEFFK RDFSASNGLF SFVLKQGDQE AVTALVENMQ HFKMGFSWGG YESLILGIFG IERIRSATKW DASKPLIRVH IGLEDPEDLI ADLSAGFERF NAVLAAKVK
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