| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2112 |
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| Symbol | rplY |
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| ID | 1169855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2210859 |
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| End bp | 2211305 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637343977 |
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| Product | ribosomal protein L25 |
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| Protein accession | NP_717715 |
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| Protein GI | 24373672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTATTG ATAACGATAA CCCGCTTGTT CCTTATCTAT TCAGGGTCGT GTCGTTCTTG
TGCCTACTGG GTAACTGTGT TAGTATGCGC GCGCTTTATA TGAGTCACCA TTGGTCGAAA
ATGGTGACAT TTTTTACTCT AAATTTAAGT GAGAAACACA TGTCTTACAC TATCACAGCA
CAAACCCGCA CTGAAATAGG GAAAGGTTCG AGCCGCCGCC TACGTCATGC AGGTAAAGTT
CCTGCAGTTA TTTACGGCGC AGGCAAAGAG CCAGTTTCTA TTGTTTTTGA TCACAAAGAC
ATCATCAACG CTCAAGCAAA CGACGATTTC TACACTTCAG TAGTAACTAT CGTTTTAGAT
GGCAAAGAAG TAGGCGTTCG TGCACAAGCT ATGCAACGTC ACGCGTTCAA GCCAATCATC
GAACACGTTG ACTTCGTTTA CGCTTAA
|
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| Protein sequence | MFIDNDNPLV PYLFRVVSFL CLLGNCVSMR ALYMSHHWSK MVTFFTLNLS EKHMSYTITA
QTRTEIGKGS SRRLRHAGKV PAVIYGAGKE PVSIVFDHKD IINAQANDDF YTSVVTIVLD
GKEVGVRAQA MQRHAFKPII EHVDFVYA
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