Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2099 |
Symbol | hoxK |
ID | 1169843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2196869 |
End bp | 2198005 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637343965 |
Product | quinone-reactive Ni/Fe hydrogenase, small subunit precursor |
Protein accession | NP_717702 |
Protein GI | 24373659 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACAC ATGCAGCCCT CTATGAACAG GGAAAGGCGC GCTTAGATGC ACTGCGCCAA TTCGCTCCCC GTCAACAGCA AACATTACTC GAAAAATTAC AGCAACACGG CATCTCACGC CGTGATTTTA TGAAATGGAG TGCCATGGTG ACGGGGATGC TCGCCCTACC ACTCCCCTTT AGTAACTTAG TTGCTGAAGC GGCCGAACTC GCCGACCGTG TACCCTTAAT TTGGTTACAT ATGGCTGAAT GTACTGGCTG CTCCGAATCC TTAGTTCGTG CCGATACCCC CAACTTAGAT TCGCTGATCT TTGATCATAT CTCTTTGGAA TATCACGAAA CCTTAATGGC TGCTGCCGGT TGGCAAGCTG AGGAAAACCT AGAGCACGCA CTCGAAACCT ACAAGGGGCG CTATTTACTG GCCGTTGAAG GAGCAATCCC AACCGCCAAT AACGGCAGTT TCTTAACCGT AGGTTGTAAA GGCCACACAG GTCTAGAAAT CGTCAAACAT GCAGCTGAAG GCGCCGCTGC GATTATCTCT GTTGGCACTT GTGCAGCATT TGGTGGCGTG CAAGCCGCGT ACCCTAACCC TACGGGGGCT AAGGGCGTGC ACGAAGTGGT CAGCAAACCC GTGATTAACT TAGGTGGTTG CCCACCGAGC GAAAAGAACA TCGTCGGCAC CCTGATGTAT TTCATCATGT TCGGTAAATT GCCCGCACTC GATATGTTCA ACCGTCCAAA ATGGGCCTAT GGCGCACGGG TACATGATAA CTGTGAACGT CGTGGCCGTT TTGATGCAGG TGAGTTCGTT GAAGAATTTG GCGATCACGG CGCGAAAGAA GGCTACTGCC TCTATAAAGT CGGTTGTAAA GGTCCCTACA CCTATAATAA CTGCCCAACG GAACGCTTCA ACCACCACAC CAGCTGGCCA GTGTTAGCGG GCCACGGCTG TATGGGCTGC TCTGAACCTA ACTTCTGGGA CGATATGGCT GACTTTGAAA AACCCCTTGG CCGTCAACTG CTCCATGGAT TGGATGCAAC CGCAGACACC GTCGGTGCGG TGATTTTAGG CGCGACAGTC GTTGGCATTG GCGCCCACGC CGTTGCCAGT ATTTTTGCCA AGCCGCTGGA GGAATAA
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Protein sequence | MDTHAALYEQ GKARLDALRQ FAPRQQQTLL EKLQQHGISR RDFMKWSAMV TGMLALPLPF SNLVAEAAEL ADRVPLIWLH MAECTGCSES LVRADTPNLD SLIFDHISLE YHETLMAAAG WQAEENLEHA LETYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEIVKH AAEGAAAIIS VGTCAAFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT VGAVILGATV VGIGAHAVAS IFAKPLEE
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