| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2098 |
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| Symbol | hyaB |
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| ID | 1169842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2195162 |
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| End bp | 2196865 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343964 |
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| Product | quinone-reactive Ni/Fe hydrogenase, large subunit |
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| Protein accession | NP_717701 |
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| Protein GI | 24373658 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC GCGTTGTTAT CGACCCTATC ACCCGTATCG AGGGTCATTT ACGTATCGAA
GTTGAAGTCG ATGAGAATAA TGTCATCAAC AAAGCATGGT CATCCTCTAC GTTATGGCGT
GGTATTGAAG TCATACTGAA AGGCCGTACG CCCATGGACG TGGGTCTGAT TGTGCAACGT
ATCTGTGGTG TATGTACCTA TTCGCACTAT CGCTGCGGTA CCGAAGCGGT GGAAAATGCG
TTAGGGATCC AAATTCCCTT AAACGCAAAA TATCTGCGCT CCCTCATGCT TACCTCGCTC
TTTATGCATG ACCATATAGT GCACTTCTAT CATCTCCACG GCTTAGACTG GGTTGATGTG
GTTTCGGCCT TAAGTGCCGA CCCTGCGAAA GCCGCCCAAA TCGCCCTCAA ATATACCGAT
AAACCCATCG CTGCTGGGGA AGGTGAATTA AGAGCAGTAC AAGAGCGTGT AAAAGGCTTT
GTCGAAACCG GAAAACTTGG CCCCTTCGCC AATGCTTACT GGGGTAATGG CACCTATAAG
TTTACCCCTG AACAAAACCT GATAGCCCTA TCGCACTACC TTAAAGCCCT TGAAGTACAA
AGGGTTGCAG CAGAAATGCT CGCTATTTTC GGCGGTAAAT CCCCCCATCC ACAATCCTTA
GTGGTGGGCG GTGTGACCTC AGTGCGCGAT ATGTTAAGTC CTGCTCGTCT GCAAGAATGG
AAACAAAAAC ACGAGATCGT AACCGACTTT ATCCTGCGTG CTTATCAGGC TGATATCGTG
ATGGCTGCGG AAGCCTTTGG CACTGAGCCT AGCGTACTAG GCGGCGTGAA TGTTAAAAAC
TTCATGGCAA CCAACGATTT TGTGCTTGCC AATGGCGAAT ATTTGTTCGA CCAAGGCGTG
ATTATGAATG GCGATTTAGC GGGTGTGAGT GATATTAACC CTGATCTCAT CGCCGAGGAC
GTCAGCCACG CTTGGTACAA TGCTGATGCA CCACAACATC CCTACGATGG CACCACCATT
CCAAACTATA CCGGTTTTGT TGAGCGGGAT ACGGTTTACG GCAAACTACC GACCTTAGAT
GGTGATGGTA AATACTCTTG GGTGAAATCA CCTCGTTATC AAGGTGAACC CGTAGAAGTT
GGCCCGCTGT CTTGCTTGTT GGTCAGCTAT GCCCGTGGTA ATAAAGTGGT TGTCGATGCT
GTCAATGCCC TGCTTGCGCG CACAGGTCTT CCCGTGGAGG CACTCTTCAC CACCTTAGGC
CGCACCGCTG CGCGGATGCT ACAAACCGTT ATCGTGGCAC AGGAAGGCCT TAAAACCTTC
GATGCCTTGT TAACGAACAT TCAGTCTGAT GAAACCACCT ATGTGAAACC CCATATCGAT
CCAAGTAAAG AGTATGTGGG TCACGCCATG ATGGAAGCGC CTCGCGGCAT GCTAAGCCAC
TGGATCCGAA TCAAAAATGG TGTCATTGAG AACTATCAAG CCGTAGTACC GACTACCTGG
AACGCAGGTC CTGTGGATGC CAACGGCAAG ATCGGTCCCT ATGAAGCCTC ACTGATTGGT
TTGAAACTAG AAGATCCCAC TAAACCCCTT GAGGTGATAC GTATCATTCA CTCATTCGAC
CCTTGCATGG CGTGTTCAGT ACACGTGATG GATTTCAAAG GTCAAGCATT GAGCGAGTTC
CGTGTCAGCC CCAATGGTCA ATAA
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| Protein sequence | MSKRVVIDPI TRIEGHLRIE VEVDENNVIN KAWSSSTLWR GIEVILKGRT PMDVGLIVQR
ICGVCTYSHY RCGTEAVENA LGIQIPLNAK YLRSLMLTSL FMHDHIVHFY HLHGLDWVDV
VSALSADPAK AAQIALKYTD KPIAAGEGEL RAVQERVKGF VETGKLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKSPHPQSL VVGGVTSVRD MLSPARLQEW
KQKHEIVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATNDFVLA NGEYLFDQGV
IMNGDLAGVS DINPDLIAED VSHAWYNADA PQHPYDGTTI PNYTGFVERD TVYGKLPTLD
GDGKYSWVKS PRYQGEPVEV GPLSCLLVSY ARGNKVVVDA VNALLARTGL PVEALFTTLG
RTAARMLQTV IVAQEGLKTF DALLTNIQSD ETTYVKPHID PSKEYVGHAM MEAPRGMLSH
WIRIKNGVIE NYQAVVPTTW NAGPVDANGK IGPYEASLIG LKLEDPTKPL EVIRIIHSFD
PCMACSVHVM DFKGQALSEF RVSPNGQ
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