| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2090 |
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| Symbol | hypE |
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| ID | 1169834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2186020 |
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| End bp | 2187039 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343956 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | NP_717693 |
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| Protein GI | 24373650 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG TATCAACCAA AGAGAAAGCA ATTCAACTCA GCCACGGTGG TGGCGGTAAA
GAGATGAATA AGCTGATCCG CGAGCTATTT TTTACCGAAT TTGATAACCC TATCTTGCGT
AGCGAAGAAG ACGCCGCAAA ACTCGAATTA CAGGGAGCGA CAGCCTTTAC CACTGACTCT
TTCACTGTAT CACCGTTGTT TTTTGCCGGT GGTGATATTG GTAAATTGGC GGTTGCTGGC
ACTGTCAACG ATCTCGCCAT GATGGGGGCT GAGCCTCAAT ATTTAAGCTG TAGCGTTATC
ATCGAAGAAG GTTTTTCACT CAAAGACTTA ACCACAATTG TGCGCAGCAT GGCTAAAGAA
CTTAAGCAAA GCGGCGCCAG AATCGTCTGT GGTGATACCA AAGTGGTACC TAAAGGTTGC
GCCGATGGCT TGTTTATCAA TACCTCGGGG GTTGGGCGCA TTTTACGTCC GAATATCTCG
GCGGCCAATG TCGCGCCCGG TGATGCCATT ATTGTATCTC GTGATGTGGG TTGTCATGGC
GCAGCTATTT TGATGGCAAG GGAAGGTCTC TCCCTCGAGT CAGAGCTACA AAGCGATTGC
GCCACGCTCT GGCCGGTAGT CGAGCAATTG ATCGCTGCTA ATATTCCACT GCATGCCATG
CGCGATGCCA CCCGCGGCGG GCTCTCTGCC GTATTAAATG AATGGGCTGT CGCCGCAAAT
GTCGGGATCA CAGTCAATGA GGCGAGCATC CCTGTTTGTG ATGAGGTCAA AGGCTTATGT
GAACTCTATG GCTTTGAGCC GATGGATTTA GCCAATGAAG GCACCTTTAT CTTGGCCGTT
CCAAACGACA TCGCCCTTGG TGCATTGGAA ATTATGCAGC GTTTTGGTCA CTGTGAAAGC
GCGGCGATCA TTGGCACTGT CAATGACGAA TTGCCAGGCA AAGTGATCTT AAGAACCCCA
TGGAATACCA AACGTTACTT GGATTTACCC CAAGGTGAAC TGCTGCCAAG GATTTGTTAA
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| Protein sequence | MADVSTKEKA IQLSHGGGGK EMNKLIRELF FTEFDNPILR SEEDAAKLEL QGATAFTTDS
FTVSPLFFAG GDIGKLAVAG TVNDLAMMGA EPQYLSCSVI IEEGFSLKDL TTIVRSMAKE
LKQSGARIVC GDTKVVPKGC ADGLFINTSG VGRILRPNIS AANVAPGDAI IVSRDVGCHG
AAILMAREGL SLESELQSDC ATLWPVVEQL IAANIPLHAM RDATRGGLSA VLNEWAVAAN
VGITVNEASI PVCDEVKGLC ELYGFEPMDL ANEGTFILAV PNDIALGALE IMQRFGHCES
AAIIGTVNDE LPGKVILRTP WNTKRYLDLP QGELLPRIC
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