Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2065 |
Symbol | tyrP |
ID | 1169811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2162328 |
End bp | 2163515 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343933 |
Product | tyrosine-specific transport protein |
Protein accession | NP_717668 |
Protein GI | 24373625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAA ATAAATTTTT CGGCAGTTTA CTGCTGATTG CAGGCACCAC CATTGGCGCG GGCATGCTCG CACTCCCCAT CGCATCGGCC GGCCTTGGCT TTGGCATGTC GAGCATGATT ATGCTGATCT TCTGGGCATT AATGGCCTAC ACTGCCCTAC TCATGGTCGA AATCCACCAA TTTGCCCCGA GTGATGCCAG CCTCAACCAA TTAGCCCGTC ATCTATTGGG CACAAAAGGC CAAGTGGTTG CCTGTATCGC GTTAATGTTT TTACTCTATG CCCTGTGCGC CGCCTACATC GCTGGCGGTG GTGAGCAAGT GCATCAAAAA CTCACCTCTT GGTTAGGGCT AGCACTGCCG CCACAGGCGG GCGCCATCTT ATTTACCCTC TTGATTGGTA CGATTGTGGG TTTAGGTACG CACTGTGTCG ATTTGATTAA TCGCGTACTC TTTAGTTTAA AAATCATTGC GTTAATCCTA ATGCTGGCCT TATTACTGCC ACAGGTGGAA GGCACGCATT TACTCGAACT GCCGCTAGAG CAAGGGCTTA TTGTGTCGGC CATCCCAGTG ATTTTTACCT CGTTTGGTTT TCATGGTTCG ATTCCGTCCG TGGTGCGCTA CTTAGGCATC GAAGTGAAAG CGCTGCGCAA AATTATGCTG CTCGGCTCAG CGTTACCCCT GCTGATTTAC CTGCTGTGGC AACTGGGTAG CCAAGGCGTA CTAAGCCAAA GCCAATTGAT GACCAATCAA AGTCTTTCTG GCTTTATTAG TCAATTAGCG AGTGTACTTC ACAGCCAATA CTTAAGCTCA GCGATTAGTG TGTTTGCCGA TCTCGCCCTT GCGACCTCCT TTTTAGGCGT GAGCCTAGGT CTATTTGACT TTATAGCCGC CAACTTAAGG CAAGAGGATA ATGCGACGGG TCGCAGTGTC ACCGCGGCGA TCACTTTTGT GCCGCCATTA GGCTTTGCCC TTTTCTACCC ACAGGGATTT ATTACCGCTC TAGGCTACGC GGCAATCGCT TTAGTGATCC TCGCGATTTT TTTACCGGTT TCTATGGTAT GGGTACAAAG AAAACAACGG GATAAAGCCA AGCTTCCCCA AGGCTACCGC GTCGCAGGGG GAACATTAGG CTTAGTGCTC GCACTACTAT GTGGCCTTGC GGTGATTAGT GCGCAGCTTT TAGGCTAG
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Protein sequence | MTQNKFFGSL LLIAGTTIGA GMLALPIASA GLGFGMSSMI MLIFWALMAY TALLMVEIHQ FAPSDASLNQ LARHLLGTKG QVVACIALMF LLYALCAAYI AGGGEQVHQK LTSWLGLALP PQAGAILFTL LIGTIVGLGT HCVDLINRVL FSLKIIALIL MLALLLPQVE GTHLLELPLE QGLIVSAIPV IFTSFGFHGS IPSVVRYLGI EVKALRKIML LGSALPLLIY LLWQLGSQGV LSQSQLMTNQ SLSGFISQLA SVLHSQYLSS AISVFADLAL ATSFLGVSLG LFDFIAANLR QEDNATGRSV TAAITFVPPL GFALFYPQGF ITALGYAAIA LVILAIFLPV SMVWVQRKQR DKAKLPQGYR VAGGTLGLVL ALLCGLAVIS AQLLG
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