Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2054 |
Symbol | adhC |
ID | 1169802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2153860 |
End bp | 2154999 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343924 |
Product | alcohol dehydrogenase class III |
Protein accession | NP_717657 |
Protein GI | 24373614 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATG AAAAACCACA GTTTATCAAG TCTAAGGCCG CTGTGGCTTG GGGACCTAGA CAGCCGCTTA AGATTGAAGA AGTCGATGTG ATGTTACCTA AAGCTGGTGA AGTATTAGTG CGCATCGTGG CGACTGGCGT GTGCCATACC GATGCATTTA CCCTAAGTGG TGATGATCCT GAAGGTGTGT TTCCTGCGAT CCTTGGCCAT GAGGGCGGCG GGATTGTTGA GCAAGTGGGC GAAGGCGTGA CCAGCGTGCA AGTGGGCGAT CATGTGATCC CACTTTATAC GCCAGAATGC GGCGAATGTA AGTTCTGTTT ATCGGGTAAA ACCAATCTGT GCCAAAAGAT CCGTGCGACC CAAGGTAAAG GTTTGATGCC CGATGGCACC ACTCGCTTTT ATAAAGATGG CCAGCCGATT TTCCATTATA TGGGTTGTTC AACTTTTTCT GAATACACGG TATTACCTGA AATCTCATTG GCTAAGGTGA ATAAAACAGC ACCATTAAAA GAAATCTGTC TGCTCGGTTG TGGTGTCACA ACCGGTATGG GCGCGGTGAT GAATACCGCT AAGGTTGAAG CGGGCGCAAC CGTGGCGATT TTCGGCCTTG GTGGTATCGG CCTTTCGGCC ATTATTGGTG CGACCATGGC CAAAGCTAGC CGGATTATTG CCATCGATAT TAATGAATCC AAATTCGAAC TTGCCCGTAA ATTAGGGGCT ACCGATTGTA TTAATCCGAA AAATTTCGAT AAACCGATCC AAGAGGTGAT TGTCGAGATG ACCGATGGCG GCGTGGATTA CTCCTTCGAA TGTATCGGTA ATGTCAATGT GATGCGCAGT GCGCTTGAGT GTTGTCACAA AGGTTGGGGC GAGTCAGTTA TTATTGGCGT GGCAGGTGCT GGGCAGGAGA TCTCGACTCG TCCATTCCAA CTGGTGACGG GCCGCGTATG GCGAGGTTCG GCCTTTGGTG GTGTTAAAGG TCGCTCACAA CTGCCTAAAA TCGTTGAACA ATACCTTGCA GGTGAGTTTA AGCTCGATGA CTTTATTACT CACACTATGG GACTCGAACA AGTGAATGAG GCCTTTGACT TGATGCATGA GGGCAAGAGC ATTCGCAGCG TGATCCATTT CGATAAATAG
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Protein sequence | MSNEKPQFIK SKAAVAWGPR QPLKIEEVDV MLPKAGEVLV RIVATGVCHT DAFTLSGDDP EGVFPAILGH EGGGIVEQVG EGVTSVQVGD HVIPLYTPEC GECKFCLSGK TNLCQKIRAT QGKGLMPDGT TRFYKDGQPI FHYMGCSTFS EYTVLPEISL AKVNKTAPLK EICLLGCGVT TGMGAVMNTA KVEAGATVAI FGLGGIGLSA IIGATMAKAS RIIAIDINES KFELARKLGA TDCINPKNFD KPIQEVIVEM TDGGVDYSFE CIGNVNVMRS ALECCHKGWG ESVIIGVAGA GQEISTRPFQ LVTGRVWRGS AFGGVKGRSQ LPKIVEQYLA GEFKLDDFIT HTMGLEQVNE AFDLMHEGKS IRSVIHFDK
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