Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2043 |
Symbol | |
ID | 1169792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2141450 |
End bp | 2142097 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343914 |
Product | putative sulfite oxidase subunit YedZ |
Protein accession | NP_717646 |
Protein GI | 24373603 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAACA TCACGGCGTT AAGAGTCTCG CCAAAACAGC TGCTCTGGGT AAAGTTAGTC TTTCATTTGA TTGGGCTTAT CCCGATTACT TGGTTGGTTT TTACTGTGTT GTCGAGCCGG GCGGGCGGCG ACCCTGTGCA GCATATTATC CACTTTACTG GAATTGGCGC ACTCAATGCG CTACTGACAA CACTACTGAT TTCACCTATT GCCAAGAGAT TTAAGTTAGG TTGGTTAATG CAGACTCGAA GGCTTGTCGG CCTGTATGTG TTTGCCTATG CCACACTGCA TATTGTGGCG TTTTTCAGCC TAGATTTGTT GTTTGCGTGG GGGTTGTTTT TAAGTGAAGT CGCTAAACGG CCTTATATTT TAGTTGGCGC CGTGGCTTAT GTGATAGTGA GCGCCTTAGC GTTTACCTCA TTTAAGATCC TAATGCGTAA AATGGGGCGA CGCTGGCAAA CGCTGCACAA TGGGGTGTAT CTTGTGGCGA TACTGGCACC AATCCATTTT TATTGGTCAG TAAAATCCGA AATCGTTGAG CCTAGCCTGT ATATTCTCGG GTTTAGTTTG CTACTGGCCT GGCGTTTACC GATTTGGCAG AAGATGCGCA CCAGTCGTTT GGCAATGGCT GCAAAGGACA AGCAATAA
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Protein sequence | MFNITALRVS PKQLLWVKLV FHLIGLIPIT WLVFTVLSSR AGGDPVQHII HFTGIGALNA LLTTLLISPI AKRFKLGWLM QTRRLVGLYV FAYATLHIVA FFSLDLLFAW GLFLSEVAKR PYILVGAVAY VIVSALAFTS FKILMRKMGR RWQTLHNGVY LVAILAPIHF YWSVKSEIVE PSLYILGFSL LLAWRLPIWQ KMRTSRLAMA AKDKQ
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