| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2006 |
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| Symbol | |
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| ID | 1169758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2104758 |
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| End bp | 2105705 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343881 |
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| Product | NifR3/Smm1 family protein |
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| Protein accession | NP_717612 |
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| Protein GI | 24373569 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTAA TTTTGGCCCC GATGGAAGGC GTGGTTGATG ACTTAATGCG AGATATTTTG
TCGTCGATTA ACCCCTACGA TTTGCTTGTT ACCGAATTTG TGCGTGTGGT TGACCAACTC
TTACCGGAGA AGGTCTTTCT TAAACTGTGC CCAGAGCTAC TGAGCGGCGG CTATACCCCA
TCGGGCACCC CTGTTCGCGT GCAATTATTA GGGCAAGAAC CCAACTGCAT GGCCGAAAAT
GCCATGCGCG CCATTGAACT TGGCTCCCAC GGCGTAGATG CAAACTTTGG CTGCCCTGCC
AAGATGGTCA ATCGCAGTAA TGGCGGGGCT GTTCTGTTGC AGTACCCCAA TACCATTCAC
GATATTGTGC GCGCGATGCG CCAAGCGGTG CCGGCTGAAC ATCCAGTAAC CGCCAAAATT
CGTTTAGGCT ACGAAGATAA ATCGCTATTT ATGGAAAATG CACTGGCTGT CTATGAAGCT
GGCGCCACTG AGCTTGCGAT TCATGCCCGC AGTAAAGTAG ATGGTTACAA ACCACCCGCC
TACTGGGAAT ACATCACCGA AGTGCGCGAA CGCTTACCTA TCCCAGTGAT TGCCAACGGT
GAGATTTGGA ACCGTGACGA CGCCAAACGT TGTATGCAAG TAACAGGCTG CGACAGCATC
ATGATTGGTC GCGGCGCGAT TTCGCTCCCC AATCTTGCCG ACACCATAAA AACAGGTGCA
ACACCCTATA GTTGGGCCGA CACATTACAG TTAATGCTCA GTTATACCCA AAGGGAGCTT
AGTGGCCGTA AGAGTGATTA TTATCCAGCG CGCATCAAAC AGTGGTTTAG CTATCTCAAT
CGCCAATATC CCGAGGCAGA TACCCTATTT CGGGAGCTTA GGATCTATAA AACCACTGAA
GAAATTGTAC GCGTGCTAGA GCAAGCTCAA CATCACCTTA ATCAGTAA
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| Protein sequence | MRVILAPMEG VVDDLMRDIL SSINPYDLLV TEFVRVVDQL LPEKVFLKLC PELLSGGYTP
SGTPVRVQLL GQEPNCMAEN AMRAIELGSH GVDANFGCPA KMVNRSNGGA VLLQYPNTIH
DIVRAMRQAV PAEHPVTAKI RLGYEDKSLF MENALAVYEA GATELAIHAR SKVDGYKPPA
YWEYITEVRE RLPIPVIANG EIWNRDDAKR CMQVTGCDSI MIGRGAISLP NLADTIKTGA
TPYSWADTLQ LMLSYTQREL SGRKSDYYPA RIKQWFSYLN RQYPEADTLF RELRIYKTTE
EIVRVLEQAQ HHLNQ
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