Gene SO_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1988 
Symbol 
ID1169744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2090538 
End bp2091152 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content46% 
IMG OID637343867 
Productmethyltransferase 
Protein accessionNP_717595 
Protein GI24373552 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA ACCCATTCGA GAAAAAGCTG GTTCAGCATC CGCTGCGTTT TTGGTTACAA 
AACCATATTG AAGCGCCGTT ATTGACGTCA ATGATGCCTA AACCGCAGCC TTATATTCAA 
CACGCGCTCG AAATCGGTTG TGGTTTTGGC AATGGTATTC ATTTGATCCG TGAGCATTTT 
GGCGCCGAGC ATGTTACCGC GGTGGATCTC GACCCTGAGA TGGTGAGTGC AGCTAAGGCT 
TATTGGCGCA CTTCAACCCA TGGGCTAGAA CAGCTTGAAT TTAGTATTGC CGATGCGACC 
GCATTGCCTT TTAGGGAGGC GCAGTTTGAC ACAGTGTTTA ATTTTGCGGT GTTTCATCAT 
ATCCCCGACT GGCAATCCGC TATTGTTGAA GTTGCCAGGG TATTAAAGCC GAACGGGTAT 
TTTGTGATTG AAGATCTTTA CCGTGCCGCG ATTTGTAATC CGTTGAGTCG TCGGCTCTTT 
GAGCATCCGC AGCAGAATCG GTTTAATCAT CAACAATTAT TACATATGCT TCGCCAAGCG 
GGCTTTCAAA TTGTATGCGA CAGGAATTTG TTTAATTTGA GTGGTATGGT GCTGGCTCAG 
AAGGGGTGTG CTTAA
 
Protein sequence
MKLNPFEKKL VQHPLRFWLQ NHIEAPLLTS MMPKPQPYIQ HALEIGCGFG NGIHLIREHF 
GAEHVTAVDL DPEMVSAAKA YWRTSTHGLE QLEFSIADAT ALPFREAQFD TVFNFAVFHH 
IPDWQSAIVE VARVLKPNGY FVIEDLYRAA ICNPLSRRLF EHPQQNRFNH QQLLHMLRQA 
GFQIVCDRNL FNLSGMVLAQ KGCA