| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1957 |
|---|
| Symbol | |
|---|
| ID | 1169717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 2063278 |
|---|
| End bp | 2064438 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637343840 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_717564 |
|---|
| Protein GI | 24373521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA ATTCTTATCA AACCTTTATT GCTTCGTTAG TGATGTTGAC AAGCCAAGCA
TTTATTGCGC CTAACCTTAT GGCTCAGCAA GCGGTAATAC CTCAGGCTCT ACCTGAGGTT
TATGCCACGC TTGATGGTGC TGTGGGCGGC ATTAGTTTTA CCTCAAGCGA TAGGCTTATC
TTTAGTTATC ACCCTTTTTA TCAACCCAAA GTCAAGGTGG GTGAGTTACT GGCTGATGGT
AAAGTCAAAC CTTTTCCCAA TTCAAATTGG CAACAATGTC ATGATCCCCA AGGAAAACCG
AAAGATCCTA ATACCTGTTT AAATTGGGTA TTAGGTTTGC GAACCGACGA TAGGGACAGA
GTATGGTTGC TCGATTCTGG CCAAGCTGAA CCCCGGATTG AACCTAAGTT GGTGGCATGG
GATACCCGTA AAAATCAGTT AGATCGGATT ATCCCGTTGC CTTTCCCTGT GTCCATTCCG
GAGTCGCAGC ATAATGATTT TGTCATTTCC AACCGTCATC AAGCGATTGT GATAGCTGAT
GAAGCAATTG CAACAGGCCC TGTTGGTGAT AAGGCTGCCT TAGTTGTCGT GGACTTAACT
ACGGGTGAGA GTCGGCGTGT ATTACAGGGT GACTCTAGTG TGATGCCAGA TCTGCAGCGA
CCGCTGATTA TTGATAGTAC CAGTGCCAAT CCAAAGCGTA TTGAGGTGTT TGTTGGCGCC
GATGGTATTG CCTTAGACAG TGCCCAACAT TGGCTTTATT TTGCGCCGAT GAATAAGGAC
AAAGTCTATC GTGTCGCGAT GGCAGATCTA CTTAATCCTG ATCTAAGCCC ACAAGCGCTA
TCCGCCAAGG TTGAAGAATA CGCCGATAAG CCAAATAACG GCGGCTTAAG CATTGATTCG
GCTGATAATC TTTATCTCAC CGAAGTTGGT GAACGCGCCA TAGGTATTAT CCCTGCCACG
GGGCGTCAAT ATCAAACCTA TGTGTATGAC GAGCGCATGG TATGGCCCGA TGGTGTAAGT
TTTGGCAAGG ATGGCTACCT GTATTCTGGC GCCGCCCAAC TGCCGCTATC CGGCGCATTA
AACAATGGCA AAGCAGAAAA CCGTGCACCG TATTACATCT TCCGCTTTAA ACCCTTAGCA
GCCGGCGTCC CAGGTAACTA A
|
|---|
| Protein sequence | MKFNSYQTFI ASLVMLTSQA FIAPNLMAQQ AVIPQALPEV YATLDGAVGG ISFTSSDRLI
FSYHPFYQPK VKVGELLADG KVKPFPNSNW QQCHDPQGKP KDPNTCLNWV LGLRTDDRDR
VWLLDSGQAE PRIEPKLVAW DTRKNQLDRI IPLPFPVSIP ESQHNDFVIS NRHQAIVIAD
EAIATGPVGD KAALVVVDLT TGESRRVLQG DSSVMPDLQR PLIIDSTSAN PKRIEVFVGA
DGIALDSAQH WLYFAPMNKD KVYRVAMADL LNPDLSPQAL SAKVEEYADK PNNGGLSIDS
ADNLYLTEVG ERAIGIIPAT GRQYQTYVYD ERMVWPDGVS FGKDGYLYSG AAQLPLSGAL
NNGKAENRAP YYIFRFKPLA AGVPGN
|
|---|
| |