Gene SO_1932 details

Gene Information

• Locus tag: SO_1932
• Symbol: sucC
• ID: 1169694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2038496
• End bp: 2039662
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343817
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: NP_717539
• Protein GI: 24373496
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGC ATGAGTATCA GGCAAAATCC TTATTTGCCG AATATGGTTT ACCAGTGTCA 
GAAGGTTTTG CCTGTGATAC AGCCCAAGAA GCTGTAGAAG CGGCAGGACG TATTGGCGGA 
AATTTATGGG TTGTTAAGTG TCAAGTACAC GCAGGCGGCC GCGGTAAAGC GGGTGGCGTT 
AAAGTCACTG GCGATAAAGA AGAAATCAGA GCCTTTGCCG AATACTGGTT AGGCAAAAAT 
CTGGTGACTT ATCAAACTGA TGAGAAAGGT CAGCCGGTTG CTAAAATTTT AGTAGAAAGC 
TGCACCGACA TCGCGAACGA ACTGTACTTA GGTGCAGTTG TTGACCGTGC TACCCGTCGT 
GTGGTGTTCA TGGCATCAAC AGAAGGCGGT GTTGAGATTG AGAAAGTGGC CGAAGAAACG 
CCAGAACTCA TTCACAAAGC GATCATCGAT CCGCTGACAG GTCCTCAACC ATTCCAAGCG 
CGTGATCTTG GCTTCAAACT GGGCTTAAAC CCAACTCAAA TGAAGCAATT CACCAAGATC 
TTCATGGGTC TGGCAACGAT GTTCGTTGAC CACGATTTCG CGCTCTTAGA AATCAACCCA 
CTGGTTATCA CCACTGAAGG TAACCTGCAC TGCTTAGACG GTAAAATTGG TATCGATGGC 
AACGCACTGT TCCGTCAACC AAAAATCAAA GCTATGCACG ACCCATCTCA AGATGACGCC 
CGTGAAGCCC ATGCTGCGAT GTTCGAACTG AACTATGTGG CTCTGGATGG TAACGTTGGT 
TGTATGGTGA ACGGTGCAGG TCTTGCTATG GGTACGATGG ACATCGTTAA TCTGCACGGC 
GGCAAGCCAG CTAACTTCCT CGACGTAGGT GGTGGCGCGA CCAAAGAACG TGTTGCAGAA 
GCATTCAAGA TCATTTTGTC TGACAGCAAT GTGAAAGCCG TTCTGGTTAA CATCTTCGGT 
GGTATCGTAC GTTGTGACAT GATCGCAGAA GGTATCATTG GCGCTGTTAA AGAAGTGGGC 
GTTAAGGTTC CAGTTGTGGT TCGTTTAGAA GGTACTAACG CTGAATTAGG CCGTGAAGTA 
TTAGCTAAAT CAGGTCTTGA TATCATTGCA GCTAACAGTC TGACTGATGC GGCTGAGCTA 
GTAGTTAAAG CTGCGGAGGG CAAATAA 

 

Protein sequence

MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGRIGG NLWVVKCQVH AGGRGKAGGV 
KVTGDKEEIR AFAEYWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR 
VVFMASTEGG VEIEKVAEET PELIHKAIID PLTGPQPFQA RDLGFKLGLN PTQMKQFTKI 
FMGLATMFVD HDFALLEINP LVITTEGNLH CLDGKIGIDG NALFRQPKIK AMHDPSQDDA 
REAHAAMFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE 
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV 
LAKSGLDIIA ANSLTDAAEL VVKAAEGK