Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1929 |
Symbol | sdhB |
ID | 1169691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2033396 |
End bp | 2034103 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343814 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | NP_717536 |
Protein GI | 24373493 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGG AATTTGCAGT TTATCGCTAC AATCCTGATG TAGATACAAA ACCTTACATG CAGGATTACA GCCTTGAAGT CGCTGATGGC ACTGACATGA TGGTGCTCGA TGCACTTATC AAGTTAAAAG AAAAAGATCC AACCTTAGTG TTCCGTCGCT CTTGCCGTGA AGGTGTTTGC GGTAGCGATG GTCTGAACAT GAACGGTAAA AATGGTCTGG CTTGTATTAC CCCAGTCTCT ACCTTCAAAG GTAAGAAATT GGAAATTCGT CCACTGCCAG GTATGCCAGT CGTTCGTGAC TTAGTGGTTG ATTTAACTCA GTTCTATAAG CAATACGAGA AGATCAAACC CTTCCTTATC AATGATGATA AGCAGCCAGC TCGTGAACAT TTACAGTCAC CTGAACAACG TGCGCATTTA GATGGTCTGT ACGAATGTAT TATGTGTGCC TGTTGTTCAA CGGCTTGCCC ATCATTCTGG TGGAATCCTG ATAAGTTTAT CGGTCCTAGC GGTCTGCTAC ACGCTTACCG TTTCTTGATC GACAGCCGCG ATACAGCAAC AGAAGAACGT CTTTCTGAGC TGGACGACGC CTACAGCGTG TTCCGTTGCC ATGGCATCAT GAACTGCGTT GACGTATGTC CAAAGGGACT TAATCCGACT AAAGCAATTG GTCATATTAA GTCAATGCTG CTTAAGCGAG CTGTGTAA
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Protein sequence | MKLEFAVYRY NPDVDTKPYM QDYSLEVADG TDMMVLDALI KLKEKDPTLV FRRSCREGVC GSDGLNMNGK NGLACITPVS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPFLI NDDKQPAREH LQSPEQRAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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