Gene SO_1927.1 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1927.1 
Symbol 
ID1169689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2031261 
End bp2031614 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content47% 
IMG OID637343812 
Productsuccinate dehydrogenase hydrophobic subunit 
Protein accessionNP_783480 
Protein GI28275225 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATGG TAACCAATGC AGCAAGTTTT GGACGCAGTG GTGTTCATGA CTTTATTCTA 
CTACGCGCTA GTGCAGTAAT CCTCGCCTGT TACACCATTT TCATGGTTGG CTTTATTGCA
TGTAGTTCCC CTCTCACCTA TGACGCTTGG CATGGCCTCT TCAGCGCTCT GCCTATGAAA
GTGTTTACAC TGCTTACGCT GGTTGCACTG CTTGTTCACG CTTGGATTGG TGTATGGCAA
GTATTGACGG ATTACGTCAA GTGCACATCG TTACGCGGTG TTTTACAGTT CACCTTTGTC
GTTACCGTTT TCTGCTATTT AGCGGCCGGC ATTGTTATTG TGTGGGGTGT CTAA
 
Protein sequence
MGMVTNAASF GRSGVHDFIL LRASAVILAC YTIFMVGFIA CSSPLTYDAW HGLFSALPMK 
VFTLLTLVAL LVHAWIGVWQ VLTDYVKCTS LRGVLQFTFV VTVFCYLAAG IVIVWGV