| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1893 |
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| Symbol | mvaB |
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| ID | 1169658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1989479 |
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| End bp | 1990426 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637343782 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | NP_717501 |
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| Protein GI | 24373458 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCGC AGGATCTTTC GAACTTAAGC GCGACCTCGT TAAGCGCCAC CTCGGATAGC
GTCAGCTTAT TCGAGATGGG GCCCCGTGAT GGATTGCAGA ATGAAGCAGC CGTCCCGACA
CAGGCCAAAG TCGCCTTGAT TGAAGCCCTT GCCAATGCAG GCGTGAAGCG AATTGAAGCA
GGCAGTTTTG TGTCCCCCAA ATGGGTGCCA CAAATGGCCG ATAGCGGCGA AGTATTGCGC
CAAATTCGCC GTCAAGCGGG CGTGGTTTAC AGCGCCCTCA CGCCTAATGT CAAAGGCTTA
GAGCTGGCGC TGGATGCAAA AGCTTCCGAA GTTGCTATCT TTGGTGCGGC GTCGCAAAGC
TTTAGCCAAC GCAATATCAA CTGTTCGATT GAAGAGTCGA TTGAACGCTT TATCCCGTTG
ATGGACATGG CAAAAGCTGC CAATATCCCA GTACGTGGCT ATGTGTCCTG CGTTTTAGGT
TGCCCCTATG AAGGGGAAAT CGCGGCGAGT GAAGTGGCAA GAGTGTCTGA AATCCTTTAC
AAAATGGGCT GTTACGAAAT TTCGCTCGGT GACACTATCG GTGTAGGCAC GCCGTTAAAA
GCCCGTAAAA TGCTGCAAGC CGTGATGGAG CGAGTGCCGG TTGAAAAGCT CGCTCTGCAC
TTCCACGACA CCTATGGCCA AGCATTAGCC AATATTACCG CCTGCCTCGA TTTAGGCGTG
CGCAGCTTTG ATGCCTCAGT GGCGGGCCTT GGCGGTTGCC CCTACGCCAA AGGTGCGTCT
GGCAATCTGG CGAGCGAAGA CTTGGTCTAT ATGCTCCACG GGCTCGGCTT GAAGACGGGT
ATCGATTTAG AAAAACTGGC ATTAGCGGGT TTTGGGATCA GCAAACAATT AAATCGTCTT
AATGGCTCTA AAGTCGCCAA TGCAATCTTG CAGGGCGCCA AAGCCTAG
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| Protein sequence | MSAQDLSNLS ATSLSATSDS VSLFEMGPRD GLQNEAAVPT QAKVALIEAL ANAGVKRIEA
GSFVSPKWVP QMADSGEVLR QIRRQAGVVY SALTPNVKGL ELALDAKASE VAIFGAASQS
FSQRNINCSI EESIERFIPL MDMAKAANIP VRGYVSCVLG CPYEGEIAAS EVARVSEILY
KMGCYEISLG DTIGVGTPLK ARKMLQAVME RVPVEKLALH FHDTYGQALA NITACLDLGV
RSFDASVAGL GGCPYAKGAS GNLASEDLVY MLHGLGLKTG IDLEKLALAG FGISKQLNRL
NGSKVANAIL QGAKA
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