Gene SO_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1758 
Symbol 
ID1169533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1839228 
End bp1839920 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content48% 
IMG OID637343646 
Producthypothetical protein 
Protein accessionNP_717368 
Protein GI24373325 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTG CTGACCGCCT ATTTCAAATA GTGCAAATTC TTAAACATAA ACGCTTAACC 
ACTGCCCAAG AGTTGGCCGA ACGGTTAGAA GTATCGACGC GCACCGTGTA CCGTGATGTG 
CAGGATTTGT GTTTAAGCGG CATTCCCATC GAAGGTGAGG CGGGCGTGGG CTATCTATTA 
CGCCATGAAG TGAATGTGCC GCCCCTGATG TTTAACGAAG CCGAATTGGA GGCGATTCAA 
GTTGGTATGC GCATGGTACA AACCTGGGGC GGCAAGGAGC TTGGGAGTGC GGCGCGCCAA 
GCGATGATAA AAGTTGAGGC GGTGTTACCT AAGCGCTTAC AAGCCTATCA ATCGTTAATG 
TTTTCACCGG ATTTTTATTT AGATTCCAAT GAGTTTCAGT TTCTTGATCC ACTGCGTCAT 
GCATCTCAGC GTCGTGAGTA CGTTAAGCTC TTTTACCAAG ATGCCAATAA AGCACTGACT 
GAGCGCGAAG TACGGCCGCT GGCGATCTAT TTCTGGCGTG GCACTTGGAC CTTACTTACA 
TGGTGTGAGC TGCGGAGCGA TTTTCGTAAT TTTCGTGTTG ATCGCATCAC GGGTTTATTA 
ACGCTTAACC GCCATTTTGA GCCAACGCCG GGGCAAGAGT TAGAGGATTA TATTTGTTTG 
ATGGAAAATC ATATGCATGA CCGAGGGCAA TAA
 
Protein sequence
MRRADRLFQI VQILKHKRLT TAQELAERLE VSTRTVYRDV QDLCLSGIPI EGEAGVGYLL 
RHEVNVPPLM FNEAELEAIQ VGMRMVQTWG GKELGSAARQ AMIKVEAVLP KRLQAYQSLM 
FSPDFYLDSN EFQFLDPLRH ASQRREYVKL FYQDANKALT EREVRPLAIY FWRGTWTLLT 
WCELRSDFRN FRVDRITGLL TLNRHFEPTP GQELEDYICL MENHMHDRGQ