| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1699 |
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| Symbol | |
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| ID | 1169487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1786612 |
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| End bp | 1789839 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343601 |
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| Product | transcriptional regulator |
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| Protein accession | NP_717310 |
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| Protein GI | 24373267 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA GCACATTTTT TTTGGGTGAA TGGCAAGTCA ATCCCAGCGC CAACAGCCTA
CTCCTTGGTA AACAAGTTAA ACAACTTGAA CCTAAGGCGA TGGATGTATT GTTATTTCTC
TGCCAAAACG CCGGTGAAGT GGTCAGCAGC GACGAAATTG TCAGCCATTG CTGGCCGGGG
GTAGATACCG GTGATAACCC GCTGCACAAA ATTATCAACC AGTTACGTCG CGCCTTAGGC
GATAGCGCCA CCGAATCCCG TTACATTGAA ACCATTCGCA AGCGCGGTTA TCGCACCTTA
GCCGAGGTGC GCTTTCCCGT CGGCCACGAG GCCAGCGCCA CGCCACAAAC CTGGCAAGGT
GGCTCGCCTT TTCCGGGCCT GCAAGCCTAC AGTGCCAACT ATGCCGAGGT GTTCTTCGGC
CGCAGCGAGC AAATTAGCAC CCTGCTGAAT CGCATTAGCC AACAAATCCA ATTTGGCCGC
GCTTTCTGCT TAATTTTAGG CCCCAGTGGT AGCGGTAAAT CCTCCTTAAT TAATGCCGGC
GTATTGCCTA ACCTAATGGC TGCCAATGGC TTTAATGGTG TTGGGGTTGT GGCCTATAGC
AGCCTCGATT TTGCCGATGT CAGCAAGGGA CAGCTGCTCA CCGATCTGGC CAGCGCCATG
CTCGACTGGG AGATAAACGA CACCCCGGTA TTTGAGGGAA TGAGCGCCGA TACGCTTGCC
ACCAAGCTTG AGCAAGATCC GCAGAGCATT GTCGACATAT GTAAACAAAG TCTTAAAAAT
CAGACCTATG CTACGCCACG CTTTGCCTTG TTTATCGACC GATTAGAGGT CTTATTATCA
TCGCCGCTGT TTAGCGATGC CGAGCGCAGC ACCTTTATCG AGCTGTTAGA GCGCCTTGCC
ACTTCCCATG TGGTACTGAT TTTAAGTGCC TGTCGTAACG ATTTTTATCC GCTGCTGGTC
AATTACCCCA GCCTGATGGC GGGCAAAGCG CGCGGCGCCC ATTTCGACTT AGCGCCGCCC
ACTCGCACTG AGCTGTTGCA AATGATCCGC CTGCCGGCAA TTGCCGCCAA TTTAACTTGG
GAAATCGATA GCGACACTGC CATGCCGCTC GATGAAATGC TCTGTAGCGA TGCCGCCAGT
AACCCAGATG CGTTGCCTAT GTTGCAATAC ACCTTGCAGG CGCTGTATTT ACAACGCAGC
GACGATGACA AACTATTAGT CTCCGTGTAT CGCACCTTGG GCGGTATCGA AGGCGCTATC
GGTAAAAATG CCGAGCAGGC GATTTGCCAT TTAACCGATG CCGAAAAAGC CAGTCTGCCG
CGGATTTTGT CCCTGTTAGT CACCCTGCGT GAGGATGAAA AATCCATCAC CAGCCGTACC
GCCCGCTGGT CGCAGTTGCA AAACTCAGCC GAAACCGCCC TAGTACAAGC CATGGTCGAC
AGCCGCTTAT TTGTGTCCCA TCTGCAAAAT GGTGAGCCCT GTTTTAGCAT CGCCCACGAA
GCTCTGCTGC GCCGCTGGCC AAGGGCGACG GCGTGGATCA GCGAACATAA GGACAGCCTC
AGTATTAAGA GCCGCCTCCA GCATTTATCC CAGCGCTGGT TAAGCGAAGC CAAACATAGC
GCTTATTTAC TCGCTGAGGG TAAACCCTTA AAAGAAGCCC AAAGCCTCAG GCAAAACCCC
TTATTTGACT TAGACGAGCG GGAAACCGAC TTTATTGCCG CCTCCAGCAA ACACGCCACA
ATCCTATGCT GGACGAGGCG CATCACAGTC GCCCTGCTGT GCGTACTCAC CTTAACCTCG
GTCATTATGA GCGTTCGCAG TATCGAAGCC GAGAAGCTGG CCCAGCAAAA ACGCCTCGCC
GCCGAAGATC TGCTCGGGTT TATGGTGGGT GACTTCGCCG ATAAGATGCG CGGCATCGGC
CGGATGGACT TACTCGACGG GATCAGTAAT AAGGCCTTGG AATATTTCAC GGATTTCTCC
AGCCAAGACG ATGAAAAGTA CTTAAGCTTC GATGCCCGCT TCCAGCATGG ACAAACCCTA
GAGGCCATGG GCGAAGTCGC CTATTCACGC AATAAAATCG ATGAAGCCCG CAGCGCCCTA
CTCGCCGCAC AGGAAAAAAT GCTGCCGCTG CTTAAGTTGC AGCCAGACAA CTTAGCCCTG
CTAAAAACCT TAGGCGCCAA TGCCTTTTGG TTGGGTCAGC TTAAATATGA TGTGAGTGAT
TGGGCGGCAT CGCGGCCGTT CTTCGAGCAA TACTTAGCCT ATAGCCAAAC CATGTATGCC
CTAGCGCCCG AGGATAAAGA TGCGCTGATG GAGCTGTCCT ATGCCCATAA CACCTTGGGC
TCAGTGTCGA TGAAACAACA GGACTTTGCT AAAGCGCAGC AAGATTTTGA GGAGTCATTA
AGGCTTAAAT TGCTCGCCTT GGCAAAAGCA CCAGAGGATA GTCAATTAAT TGCAGATGTG
GCCGATACAC GCTCTTGGTT AGCCAGTGCT GCGGTTTCAC AAGGTGATGT AATTTCGGCA
ATACGAATCC ACACTCAGCT CCAACAAGAA TTAAGCAAAA ATAATAAGCA GCCATATATT
TTAGATAGAC TATCAGCTAG TCATCAAATT CTTGCAGAGT TATATGACTA TCAAGCCCAA
CCCGAACAGG CTCTAAAACA AGCCAGACTT GGTTTAGAAG CTATTTCAAC AGCACTAGAG
AAAGATCCTA ATAATGATAT TTGGGAAAAC CAAAAGTATT ACCAATATTT CAAAGTCTTA
GTTTTTTCTC ATTCTGTAGG TGATGAAATT GAAAGATTAA AATCATTAAT TGACTCAGAT
ATTGCATTAA ACTCTTCATC AAAGAAAGAT GATGTTTATG CCAGCTTCTT TCTGGCAGCA
GCAAAAAAAC TCCAACAACA AGGGAGATTT TCTGAGAGTA TAGAATTTGT CATGCAAGCA
AAAAATGAAT TCTTCAAACT ATCTAAAAAA TACCACCAAA ACACTAATTA CATATCTAAA
TTATCAGAAA GCATTTTATT AGAGGCGAAA ACTGCTAAAG ACAAAAATAT CAAACATAAA
CTATGCCTCG ATTCAAAAAA ACTACTTTCA CCAATAATTG AAAAAGATAA ATCACCAAAC
TTTACTGTTC CCTACATTAA GTCTATTGAC TGCTTAGGTG AAGTCATTAA TGATGAGTCT
TTAAATAAGT TATTAATTGA ATCTCAAATA CAAAACACTA GATTTTAA
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| Protein sequence | MSDSTFFLGE WQVNPSANSL LLGKQVKQLE PKAMDVLLFL CQNAGEVVSS DEIVSHCWPG
VDTGDNPLHK IINQLRRALG DSATESRYIE TIRKRGYRTL AEVRFPVGHE ASATPQTWQG
GSPFPGLQAY SANYAEVFFG RSEQISTLLN RISQQIQFGR AFCLILGPSG SGKSSLINAG
VLPNLMAANG FNGVGVVAYS SLDFADVSKG QLLTDLASAM LDWEINDTPV FEGMSADTLA
TKLEQDPQSI VDICKQSLKN QTYATPRFAL FIDRLEVLLS SPLFSDAERS TFIELLERLA
TSHVVLILSA CRNDFYPLLV NYPSLMAGKA RGAHFDLAPP TRTELLQMIR LPAIAANLTW
EIDSDTAMPL DEMLCSDAAS NPDALPMLQY TLQALYLQRS DDDKLLVSVY RTLGGIEGAI
GKNAEQAICH LTDAEKASLP RILSLLVTLR EDEKSITSRT ARWSQLQNSA ETALVQAMVD
SRLFVSHLQN GEPCFSIAHE ALLRRWPRAT AWISEHKDSL SIKSRLQHLS QRWLSEAKHS
AYLLAEGKPL KEAQSLRQNP LFDLDERETD FIAASSKHAT ILCWTRRITV ALLCVLTLTS
VIMSVRSIEA EKLAQQKRLA AEDLLGFMVG DFADKMRGIG RMDLLDGISN KALEYFTDFS
SQDDEKYLSF DARFQHGQTL EAMGEVAYSR NKIDEARSAL LAAQEKMLPL LKLQPDNLAL
LKTLGANAFW LGQLKYDVSD WAASRPFFEQ YLAYSQTMYA LAPEDKDALM ELSYAHNTLG
SVSMKQQDFA KAQQDFEESL RLKLLALAKA PEDSQLIADV ADTRSWLASA AVSQGDVISA
IRIHTQLQQE LSKNNKQPYI LDRLSASHQI LAELYDYQAQ PEQALKQARL GLEAISTALE
KDPNNDIWEN QKYYQYFKVL VFSHSVGDEI ERLKSLIDSD IALNSSSKKD DVYASFFLAA
AKKLQQQGRF SESIEFVMQA KNEFFKLSKK YHQNTNYISK LSESILLEAK TAKDKNIKHK
LCLDSKKLLS PIIEKDKSPN FTVPYIKSID CLGEVINDES LNKLLIESQI QNTRF
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