Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1690 |
Symbol | |
ID | 1169480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1777149 |
End bp | 1778741 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343594 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_717301 |
Protein GI | 24373258 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCACTA CAGCGAATAT CACCATGCAG TTTGGCGCTA AGCCACTGTT TGAAAACATC TCAGTTAAAT TTGGCGGCGG TAACCGTTAC GGTCTTATCG GTGCGAACGG CTGCGGTAAA TCAACCTTCA TGAAGATCCT TTGCGGTGAT CTAGAGCCGA GCAGCGGTAA TGTATCTTTA GACGTCAATG AGCGTCTGGG TAAACTCAGC CAGAACCAAT TCGGTTACGA GGAATACACG CTGATTGACA CAGTGATCAT GGGCCACCGT GAGCTGTGGA AGGTCAAGCA AGAGCGTGAC CGTATCTACT CTTTGCCAGA GATGAGCGAA GAAGACGGCA TTGCCGTGGC AAACCTTGAA ATGGAATTTG CAGAAATGGA CGGTTACACC GCCGAATCTC GTGCCGGTGA ACTGCTACTT GGCGTAGGTA TCGGTATCGA AAGTCATTTC GGTCTAATGT CTGAAATTGC CCCAGGTTTA AAACTGCGGG TGTTATTGGC GCAAGCCCTG TTCTCGGACC CTGATGTACT GCTGCTCGAC GAACCCACCA ACAACTTGGA CATCGACACT ATCCGTTGGT TACAGGACGT CTTGAACCAA CGCGACAGCA CCATGATCAT CATTTCGCAC GACCGTTACT TCTTAAACTC AGTCTGTACC CATATGGCGG ACTTAGACTA CGGTGAACTG CGTGTTTACC CAGGTAACTA CGACGAATAT ATGCAAGCTG CGACTCAGGC CCGTGAGCGT CTGCTGGCCG ATAACGCCAA GAAGAAAGCA CAAATCTCTG AGCTGCAAAC CTTCGTGGCG CGCTTCTCTG CCAACGCTTC TAAGGCTAAA CAAGCGACTT CGCGTGCGCG TCAAATCGAT AAGATCAAGT TGGATGAGGT TAAAGCCTCT AGCCGTGTTA ACCCATTCAT TCGTTTCGAT CAGGAAAAGA AACTGTTCCG TAACGCTTTA GTGGTTGAGA ATTTGGCTAA AGGTTACGAC ACCCCCCTGT TTAAAGACTT AAACCTGATT GTCGAAGTGG GCGAGCGTAT CGCTATCCTC GGTGAGAACG GTGTAGGTAA AACCACGCTA CTGCGTACTT TAATCCATGA TATTCCACAG GATGAAGGCC ATATCCAATG GTCTGAAAAC AGTAATATCG GTTACTACGC GCAGGATCAT GAGTCTGATT TTGAAAACGA TATGACCCTC TTCGAGTGGA TGAGCCAATG GCGTAAACCT GAAGATGATG ACCAAGCGGT GCGTGGTATT TTAGGCCGTA TGCTGTTTAG CGCCGACGAT ATTAAAAAGT CAGTCAAAGT GCTGTCGGGT GGTGAAAAGG GCCGTATGTT ATTTGGCAAG CTCATTATGC AAAAGCCAAA TATCCTGATG CTCGACGAAC CGACTAACCA CATGGATATG GAATCGATTG AATCCTTAAA CAACGCGCTG GAAAAATACG AAGGCACGCT GTTGTTTGTG AGTCACGACC GCGCATTCGT ATCGTCACTG GCAAACCGTA TCCTTGAAAT CACGCCAAAC GGGGTGAATG ACTTCAAGGG CACCTACGAT GAGTTCCTTG CGAGCAAGGG TATCGAAGGC TAA
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Protein sequence | MITTANITMQ FGAKPLFENI SVKFGGGNRY GLIGANGCGK STFMKILCGD LEPSSGNVSL DVNERLGKLS QNQFGYEEYT LIDTVIMGHR ELWKVKQERD RIYSLPEMSE EDGIAVANLE MEFAEMDGYT AESRAGELLL GVGIGIESHF GLMSEIAPGL KLRVLLAQAL FSDPDVLLLD EPTNNLDIDT IRWLQDVLNQ RDSTMIIISH DRYFLNSVCT HMADLDYGEL RVYPGNYDEY MQAATQARER LLADNAKKKA QISELQTFVA RFSANASKAK QATSRARQID KIKLDEVKAS SRVNPFIRFD QEKKLFRNAL VVENLAKGYD TPLFKDLNLI VEVGERIAIL GENGVGKTTL LRTLIHDIPQ DEGHIQWSEN SNIGYYAQDH ESDFENDMTL FEWMSQWRKP EDDDQAVRGI LGRMLFSADD IKKSVKVLSG GEKGRMLFGK LIMQKPNILM LDEPTNHMDM ESIESLNNAL EKYEGTLLFV SHDRAFVSSL ANRILEITPN GVNDFKGTYD EFLASKGIEG
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