Gene SO_1677 details

Gene Information

• Locus tag: SO_1677
• Symbol: atoB
• ID: 1169469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1763183
• End bp: 1764373
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637343583
• Product: acetyl-CoA acetyltransferase
• Protein accession: NP_717288
• Protein GI: 24373245
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACTG AACTATTAAA CCAAGAGATC GTTATTGTTG CCGCTAAACG CACCCCAATG 
GGTAGTTTTC AAGGCAGTTT GTCTGGCATC ACTTCTCTGA GCTTAGCGGC CACAGCAATC 
AAAGCCCTGT TAGCCGATAC CCAAGTTGCG CCTGACAAGG TCGATGAGGT GTTGATGGGC 
TGCGTATTGC CAGCGGGTCT TGGTCAAGCG CCTGCGCGCC AAGCAACCTT AGGGGCAGGT 
TTACCGCTGT CTGTGGGTGC AACCACAGTG AACAAGGTCT GTGGTTCAGG GATGAAAACG 
GTGATGCTTG CCCATGATTT GATTAAAGCG GGCAGTGCTA AGGTGGTGAT TGCTGGTGGT 
ATGGAAAGCA TGAGCCAAGC ACCTTACTTG CTCGACAAAG CGCGCGCTGG TATACGTATG 
GGCCATGGCA AAGTGTTAGA TCATATGTTC CTCGACGGTT TAGAAGATGC TTACACTGGC 
GGCGCTATGG GCACATTCGC CCAGAAAACC GCCGATGAAT TTGGTATCAC TCGCGAGCAA 
ATGGATGCGT TTGCTTTAAG CTCACTCGAA AAAGCCAACG CTGCCATTAA TTCTGGTGCT 
TTCAAAACGG AGATAGTGCC CGTAACGGTA AGCGATCGCC GTGGTGACGT GACTATTGAT 
ACCGATGAGC AGCCAGGTAA CGCTCGCCCT GAAAAAATCC CCACGTTGCG TCCAGCCTTT 
GCTAAAGATG GCACTATTAC TGCGGCAAAC TCCAGCTCGA TTTCCGATGG TGCAGCGGCG 
CTGATGTTAA CAACGCGCGC CAATGCTGAG CAGTTAGGCT TAACTGTGCT CGCCACCATC 
AAGGGCCACA CTACCCATGC GCAGGAGCCT GCACTTTTTA CCACCGCACC CGTTGGCGCG 
ATGGCAAAAC TATTGAGTAA TGTGGGCTGG TCAAAGGATG AAGTTGATCT GTTTGAGATC 
AACGAAGCCT TCGCCATGGT GACTATGCTG GCCGTTTCTG AATTAGGTTT AGATATGACA 
AAAGTCAACG TGAATGGCGG CGCTTGTGCC TTAGGTCATC CTATCGGTTG CTCGGGCGCG 
CGTTTACTGG TGACCTTAAT CCATGCACTT AAAGCCCGCG GACTTAAGCG CGGTGTAGCG 
TCGCTCTGTA TCGGTGGTGG TGAAGCGACG GCTATGGCTA TTGAAGTCTA A 

 

Protein sequence

MSTELLNQEI VIVAAKRTPM GSFQGSLSGI TSLSLAATAI KALLADTQVA PDKVDEVLMG 
CVLPAGLGQA PARQATLGAG LPLSVGATTV NKVCGSGMKT VMLAHDLIKA GSAKVVIAGG 
MESMSQAPYL LDKARAGIRM GHGKVLDHMF LDGLEDAYTG GAMGTFAQKT ADEFGITREQ 
MDAFALSSLE KANAAINSGA FKTEIVPVTV SDRRGDVTID TDEQPGNARP EKIPTLRPAF 
AKDGTITAAN SSSISDGAAA LMLTTRANAE QLGLTVLATI KGHTTHAQEP ALFTTAPVGA 
MAKLLSNVGW SKDEVDLFEI NEAFAMVTML AVSELGLDMT KVNVNGGACA LGHPIGCSGA 
RLLVTLIHAL KARGLKRGVA SLCIGGGEAT AMAIEV