Gene SO_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1670 
Symbol 
ID1169462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1756837 
End bp1757823 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content49% 
IMG OID637343576 
Productfumarylacetoacetate hydrolase family protein 
Protein accessionNP_717281 
Protein GI24373238 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG CTAGTTATAA CAATGGTCGC CGCGATGGTC AGTTGATGTT AGTGAGCCGC 
GATCTCACTC AAACGGTGGC CGTGCCAGCG ATTGCCCATA CGATGCAGCA ATTACTCGAT 
GGTTGGGAAC TGCTCAAACC GCAATTACAA GAATTGTACG ATGCGCTCAA TGAAGGCAAA 
TTACCTAACA CGCAAACCTT TGATGAAACT AAATGTTTAT CCCCCTTGCC ACGGGCGTAT 
CAATGGGCCG ATGGCAGTGC CTACGTGAAC CACGTGGAGT TAGTCCGTAA GGCGCGCGGC 
GCTGAAATGC CTGAAACCTT CTGGACCGAT CCGCTGTTTT ACCAAGGTGG CTCTGACAGC 
TTTATCGCGC CAAAGGCGGA TATTCCGCTG GCGAGCGAAG ATTGGGGCAT CGATTTCGAA 
TCTGAAATCG CAGTGATCAC TGATGATGTA CCTATGGGCG TGAGTGCTGA AAATGCAGCA 
AAACACATCA AACTGCTGAT GTTAGTCAAC GATGTGTCAT TGCGTAATTT GATCCCGGCA 
GAGCTCGCCA AAGGCTTTGG TTTCTTCCAA TCTAAACCTT CGAGCAGCTT CTCTCCGGTA 
GCCATTACGC CAGATGAATT AGGCCATCGC TGGGAAGATT CAAAGGTGCA TTTACCGCTT 
ATCACCTACT TAAACGGTGA GTTATTCGGT CGCCCAAATG CAGGTGTCGA TATGACCTTT 
AACTTCAGTC AGTTAGTATC TCATGTCGCT AAAACCCGTC CATTGGGTGC GGGCGCCATT 
ATCGGGTCTG GTACGATTTC TAACTATGAC CGCAGTGCAG GTTCGAGCTG CTTAGCTGAA 
AAACGTATGC TCGAAGTGAT TGCCGACGGT AAAGCGAGCA CACCGTTTAT GCGCTTTGGC 
GATACAGTGC GTATTGAAAT GCTCGATGAC AATGGCGTGT CTATTTTTGG CTCAATCGAT 
CAAAAAGTGG TTGAGTACAA GGCGTAA
 
Protein sequence
MKLASYNNGR RDGQLMLVSR DLTQTVAVPA IAHTMQQLLD GWELLKPQLQ ELYDALNEGK 
LPNTQTFDET KCLSPLPRAY QWADGSAYVN HVELVRKARG AEMPETFWTD PLFYQGGSDS 
FIAPKADIPL ASEDWGIDFE SEIAVITDDV PMGVSAENAA KHIKLLMLVN DVSLRNLIPA 
ELAKGFGFFQ SKPSSSFSPV AITPDELGHR WEDSKVHLPL ITYLNGELFG RPNAGVDMTF 
NFSQLVSHVA KTRPLGAGAI IGSGTISNYD RSAGSSCLAE KRMLEVIADG KASTPFMRFG 
DTVRIEMLDD NGVSIFGSID QKVVEYKA