| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1669 |
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| Symbol | tyrR |
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| ID | 1169461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1754957 |
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| End bp | 1756495 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343575 |
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| Product | transcriptional regulatory protein TyrR |
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| Protein accession | NP_717280 |
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| Protein GI | 24373237 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGG AAGTTAGCTG TCAAGATCGC GTGGGTTTAG CGAAAGACAT CTTAGTCGTG
TTAGAACGTT ATGGCATTAA TCTCATTGCC ATTGATGCCA GTAATCAAGG CTTTCTCTAC
CTGCAATTTG CCGAAGTCAG TTTTGAAACC TTAAGTGCTT TGATGCCGCA AATCCGCAAA
GTGGAGAGTG TCCATGATGT GCGAACGGTG TCATTCATGC CGTCGGAGCA GGAACACTAC
GCCTTAAAAA CCCTGCTTAA AACCCTCCCA GACTCAGTGT TTTCCATCGA CGTGAAGGCG
CGTATTCGCA TTGTGAACGA ATCGGCGCTG CTCAACATGG GCATGGGAGA ACATGAAGTG
CTCGATGAAT CCTTAAATCA TTGGGTGCAA GGTTTTAACT TCAGCCGCTG GCTCAGTGAG
GGCCAAGTGC TGCCGCAGGC GGCGCGGGTG AATATTGGCC AAAACGAATA TCTGGCTGAA
ATGTTACCGA TTTATTTACC CGATGAGGAT GAGAAAACTA TCCTTGTCGG TGCGGTGGTG
TCGCTGAAAT CGCCTGCGCG GGTGGGTAAA CAATTTAATG CGCTGCAAAA TCAAACCACA
GGCTTTGAAA ATGTGTTGGC CAGCAGCGAC AAGATGAAAG AAGTGCTTAA ACAAGCCCGC
CGCATGGCGC AGCTCGATGC GCCATTACTG ATCACGGGCG AAACTGGCAC GGGTAAAGAA
CTCATGGCCA GAGCCAGCCA TGATGCCAGC ATGCGCCGCG AAAAGCCGTT TATCGCCATT
AACTGTGCAG CATTGCCCGA TAGCGCCGCC GAAGAAGAAC TGTTTGGCTA CGTCAGCCAA
GGCAAAGTGA TCAAGCGTGG CTTTTTTGAA GAGGCGAAGG GCGGGACTGT ATTCCTCGAT
GAAGTGGCTG AAATGTCCAA GGCGGCGCAG GTCAAACTGC TACGGTTATT ACAGGATGGC
ACTTTTAGAC GCATTGGTGG CGACGAAGAA GTCCGCGCCG ATGTGCGAAT TATCTGCTCG
ACCCAGAAAA ACTTAGCCGA GCTATGTCAA ACCGGTGAAT TTAGGGAAGA TTTGTACTAT
CGCATCCATG TGCTTAGCTA TCACATTCCG TCACTGCGTG AGCGCAAAGT CGATATTATT
CCGCTGACAG AGATGTTCCT CGAGCATTAC AGCCAGCAAT TATCCAGCCC TGTCAGGCGG
ATTTCGGCCC AATGCCGTGA TCATCTGTTA ACTTACGCTT GGCCGGGTAA CGTCCGTCAG
CTTAAAAACG CAGTCTTCAG AGCCGTATCC ATGTGGGATG GTTCGGGTGA ATTAACCGTT
GAGCAACTTA AGTTGCCATC CTACGCCGAA GGTTTTGGTT ATTTCGATAA TGCCTTTGAA
GGTAATCTCG ATGATGCGAT GAAGCAATTT GAGGCCAGCT TACTGCGCCG CTTATATCCG
GCTTACCCAA GTACTCGGCA ATTGGCAAAG AAATTGGGCG TGTCCCACAC GGCTATTGCT
AACAAACTTC GGGAATATAA GATCGCCAAG CCAAAGTAA
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| Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEVSFET LSALMPQIRK
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKA RIRIVNESAL LNMGMGEHEV
LDESLNHWVQ GFNFSRWLSE GQVLPQAARV NIGQNEYLAE MLPIYLPDED EKTILVGAVV
SLKSPARVGK QFNALQNQTT GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVIKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSGELTV EQLKLPSYAE GFGYFDNAFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKIAK PK
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