| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1662 |
|---|
| Symbol | |
|---|
| ID | 1169455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1750121 |
|---|
| End bp | 1750528 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637343569 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_717273 |
|---|
| Protein GI | 24373230 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTACCC GCAAATCGTC CCCCACTCTG AGCTTTATTG CCGAAGGCAC TAAGCTAACA
GGTAATATCG AATTTACGAG CGATGTCTTG ATTGGTGGAG CTATTCAAGG GCAAATCCTG
TCGCAGGCAA ACATTATTGT TGAGCAAACG GGAAATCTTC ACTGCGAGGT AAAATGCCGA
GAATTGATTA TCGATGGCTA TTTTAAAGGT CGTTTAATAT GTGAGCGTTT AGTCATTCAA
GCCCATGGTG TTGTTGATGG GGATGTGGCT TGTACCTCCA TGCAAATCAA TGAAGGTGGT
CAGTTTATTG GCTTAAGAAT TAAAGAAGAT AATCAGACAA TCCATGCCCA TAGCTTACCA
TCGACAACAC CAACCAATGT CTTGATATCG CAGAGTCAAG AAAACTAA
|
|---|
| Protein sequence | MFTRKSSPTL SFIAEGTKLT GNIEFTSDVL IGGAIQGQIL SQANIIVEQT GNLHCEVKCR
ELIIDGYFKG RLICERLVIQ AHGVVDGDVA CTSMQINEGG QFIGLRIKED NQTIHAHSLP
STTPTNVLIS QSQEN
|
|---|
| |