Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1638 |
Symbol | ompH |
ID | 1169432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1721474 |
End bp | 1721980 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637343546 |
Product | outer membrane protein OmpH |
Protein accession | NP_717249 |
Protein GI | 24373206 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAAGA TGGTAAACCG TGCCCTGGTG ACGTTAGCTT TATTAGGTGC ACCTTTAGCG GCGCAAGCAG AAAATATTGC TGTAGTTGAT ATGGGCGCTG TGTTTGAGCA GTTACCTCAA CGTGAGCAAA TCATGCAATC TCTGAAGTCA GAGTTTGGTG ATCGCATGTC TGAAGTTCAG AAAATGCAAG AAGAAATGCG CTCTCTGATG GAGAAGCAGC AACGTGATGG CGCGTTAATG AATGACACGC AAAAAACTGA GCTGGTTCGT AAAATGGAAG CGTTAAAATC TGAATATCAG TTGAAAGGTA AAGCGTTGGA TGAAGACTTA CGTCGTCGCC AAGGTGAAGA GCAAAACAAA CTGTTAGTGA AGGTTCAAAA AGCCATTAAC ACTATCGCTG AAAAAGAAAA ATACGATTTA GTTTTACAGC GTGGTGCAGT CATTTATGTT AAGCCAAACG CTGACATCAG TGGCAAAGTG GTTGAAGCCT TAAGCAAAGG CAAGTAA
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Protein sequence | MNKMVNRALV TLALLGAPLA AQAENIAVVD MGAVFEQLPQ REQIMQSLKS EFGDRMSEVQ KMQEEMRSLM EKQQRDGALM NDTQKTELVR KMEALKSEYQ LKGKALDEDL RRRQGEEQNK LLVKVQKAIN TIAEKEKYDL VLQRGAVIYV KPNADISGKV VEALSKGK
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