Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1627 |
Symbol | map |
ID | 1169422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1710307 |
End bp | 1711104 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343536 |
Product | methionine aminopeptidase |
Protein accession | NP_717238 |
Protein GI | 24373195 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCG TCATTAAGAC AGCAGAAGAA ATCGAGAAAA TGCGCGCGGC GGGTAAGCTT GCGGCGCAGG TGTTAGAAAT GATCGCGCCC TATGTTAAGG TGGGGGTCAG CACTAATGAA TTGAACGATA TCTGCGCAAA ATATACCGAA GAGCAAGGCG CGATTTCTGC TCCGCTCAAC TATCATGGTT TTCCAAAATC TATCTGTACT TCGTTAAACA ACGTGATTTG CCACGGAATC CCGAGCGATC GCGTTTTAAA GGATGGCGAT ATTCTCAACA TCGATATCAC TGTTATTAAA GATGGTTACC ACGGCGATAC CTCTAAAATG TTCTTAATTG GTGAGGTGAG TCCTAAGGAC AAGCGTCTGT GCCGCATCGC CCAAGAGAGT TTATATCTTG CCATTCGTAA GGTTCGTCCA GGGTTAAAAC TGGGCGAAAT CGGCAATACT ATTGAAAAAT TCATCAAAGC CAGCAAAACA GGCCTTGAGA AATATTCCAT CGTGCAAGAT TATTGTGGCC ACGGTATTGG CGCGGGTTTC CATGAAGAAC CTCAAGTGAT GCACTACCGC AATGGTGACA ACACCATTTT ACGCCCAGGC ATGTGCTTTA CCATTGAGCC GATGATCAAC GCAGGTCGCC ACACCACTGT GCTAGACCGC AATGATAATT GGACGGTGAC CACCTCCGAT GGTAAAAACT CAGCCCAGTG GGAACACACG CTATTAGTAA CACAAACTGG TGTCGAAGTA CTGACGCTGC GCGATGAGGA AGATTTCCCA CGCGTGATTA ATTACTAA
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Protein sequence | MSIVIKTAEE IEKMRAAGKL AAQVLEMIAP YVKVGVSTNE LNDICAKYTE EQGAISAPLN YHGFPKSICT SLNNVICHGI PSDRVLKDGD ILNIDITVIK DGYHGDTSKM FLIGEVSPKD KRLCRIAQES LYLAIRKVRP GLKLGEIGNT IEKFIKASKT GLEKYSIVQD YCGHGIGAGF HEEPQVMHYR NGDNTILRPG MCFTIEPMIN AGRHTTVLDR NDNWTVTTSD GKNSAQWEHT LLVTQTGVEV LTLRDEEDFP RVINY
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