Gene SO_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1524 
SymbolgrpE 
ID1169333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1600445 
End bp1601065 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content46% 
IMG OID637343453 
Productheat shock protein GrpE 
Protein accessionNP_717141 
Protein GI24373098 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG AGTCGATTAA AGCAGAACAG GATCTGATCC ATGAGGGTGT AGAGTCTGAA 
GTTTCTACTG AAGAAGCGAG TCTGATTGAT GAGCTTACCC AAGCCAATTT CCGTATTGAA 
GAGCTGGAAC AGTTACTCGC TGACGCTTTG GCGAAAGTTG ATGAGCAAAA AGATTCAGTT 
ATACGTGCTG CTGCCGAAGT GGATAACATT CGTCGTCGCG CGGCAATGGA TGTGGAGAAG 
GCCAATAAGT TTGCGCTGGA AAAATTCGCC AATGAATTGC TGCCAGTGTT AGACAATATG 
GAGCGAGCGC TGCAAGGGAC TAATCCACAG GATGAAACCA CTAAAGCGAT CTACGAAGGT 
GTTGAGTTAA CACAAAAGAG CTTGTTGACC GCTGTGGCAA AATTTGGTGT AAAACAAATT 
GATCCGCAGG GACAAGCCTT TAACCCTGAT CAACATCAAG CGATTGGTAT GCAGCCAAGT 
GCTGAATTCC CCACTAATAC TGTGATGTTA GTGATGCAAA AAGGCTATGA ACTGAATAGC 
CGTTTATTGC GCCCTGCCAT GGTGATGGTG TCTCAAGGTG GCCCTAGCCA AGAATCTGCG 
TCGATTGATA TTGAAGCCTA A
 
Protein sequence
MSNESIKAEQ DLIHEGVESE VSTEEASLID ELTQANFRIE ELEQLLADAL AKVDEQKDSV 
IRAAAEVDNI RRRAAMDVEK ANKFALEKFA NELLPVLDNM ERALQGTNPQ DETTKAIYEG 
VELTQKSLLT AVAKFGVKQI DPQGQAFNPD QHQAIGMQPS AEFPTNTVML VMQKGYELNS 
RLLRPAMVMV SQGGPSQESA SIDIEA