Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1506 |
Symbol | |
ID | 1169316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1580143 |
End bp | 1581489 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343436 |
Product | MATE efflux family protein |
Protein accession | NP_717123 |
Protein GI | 24373080 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAA TTTCCCATAG CGCAACGGAT CAACGCCTGC TGCAAGAGCC GATCGCTAAG CTTTTCTGGC GCTATACCAT ACCGACAATC GCCTCCATGC TGGTGACAGG GGTGTATGTC ACAATCGATG GGATCTTCGT GGGTCACTAT CTGGGTGAAA CGGGGCTTGC GGGCATGATG TTAGCCTATC CCGTCGGCGC GATTTTATAT GCCATCGGCG CCATGATTGG CATGGGCAGC GCGGCCTTAG TCTCAATCAA CCTTGGGCAA GGCAATGTTG CCAAGGCACG TAAATTACTC GGTAATGCCT TTAGTTTATG TTTATTAGCG GGGGCATTTT TTGCTTTAGT GGGTGGGGTC TTCTCTCGGG ATATTTTAAT TGCCCTTGGC GCTGAAGGAG AGATTCTCGA AAACGCCAAC GAATACTTAT TCTGGTATTT TGCGCTATGC CATTTCCCCA TCATTTCAAT GGCATTTACC ACCTTGTTGC GTAATGACGG TCGCCCGTCC ATGGTCACCT TCGTACTGAT CTTAGGCGGT GTGCTTAACA CCTTTTTAGA TTGGCTGTTT ATTGTGGTGT TTCCCTTTGG ATTAGCGGGC GCGGCGATTG CGACCATGCT GTCACAGGCG GTCACCGGAC TGCTATGTTT GCAGCATTTT TTTGGCGCGC GTACTCAGCT CAAAATCAAC CTCGAGCAGA TGAAGCTTAA GCTTGATAAC TGCATCAATA TCGCCCGTGT TGGATTACCA AGCTTCTTGA TGAACTTGTA TCTGTCGATT GTGTTAACCT TGCACAACAC GGCTTTTTTG TGGGTTGGCG GTCCATTGCA CGTGGCGGCA TACGGGGTGG TTAGTTATAC CGAAGCGTTT TTCTATTTGA TTTTTGAAGG TATTGCCCTC GGCACCCAAC CCATTTATAG CTTTAATGCA GGAGCAGGGC GGTTTGATCG GGTAAAGCAA GCACGTAATA TTGCCTTTAG CATGACCCTA CTCACCGCCG CGCTTGGCTT AGTGTTAATT TACTCGCGCC CTGAGTGGTT GGTGTATTTG TTCGCTGGCG ATAATCCAAG TCTTACGCCG GTTGCGATTG AAGGGATGCG TTGGTATTTT TGGGGCTTGC CGATGGAAGG CTTGATCTTA GTTGGCGCGA GTTTCTTCCA AGCGATTAAT TGTTCAAAAC AGGCATCGAT TTTAACTGGC GCAAAACTCA TACTGATTGC TGCAATTATC TATTGTTTTG CTTGGGCTTT TGGCGTGATT GGCGTTTGGG TGTCGCTCGC GACCTGTAGC ACTATGCTGG TGATTTGGAT GTTTATCGCC ATGCAGCGGC TTAAGGTTAA CGCCTAA
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Protein sequence | MTAISHSATD QRLLQEPIAK LFWRYTIPTI ASMLVTGVYV TIDGIFVGHY LGETGLAGMM LAYPVGAILY AIGAMIGMGS AALVSINLGQ GNVAKARKLL GNAFSLCLLA GAFFALVGGV FSRDILIALG AEGEILENAN EYLFWYFALC HFPIISMAFT TLLRNDGRPS MVTFVLILGG VLNTFLDWLF IVVFPFGLAG AAIATMLSQA VTGLLCLQHF FGARTQLKIN LEQMKLKLDN CINIARVGLP SFLMNLYLSI VLTLHNTAFL WVGGPLHVAA YGVVSYTEAF FYLIFEGIAL GTQPIYSFNA GAGRFDRVKQ ARNIAFSMTL LTAALGLVLI YSRPEWLVYL FAGDNPSLTP VAIEGMRWYF WGLPMEGLIL VGASFFQAIN CSKQASILTG AKLILIAAII YCFAWAFGVI GVWVSLATCS TMLVIWMFIA MQRLKVNA
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