| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1430 |
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| Symbol | dmsB-1 |
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| ID | 1169247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1493712 |
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| End bp | 1494386 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343370 |
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| Product | anaerobic dimethyl sulfoxide reductase, B subunit |
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| Protein accession | NP_717050 |
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| Protein GI | 24373008 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCAAC AAACACAATA TGGTTTCTAT TTCGATAGCA GCAAATGTAC TGGCTGTAAA
ACTTGTCATA TTGCCTGTAA GGACCGCATG ACTGGCTTGG TTCGTGCAAA AGACGATGTG
ATGAATAATG GTGTCGCTAA TTTGCCCGGT ATTATTTGGC GCCGTGTTTA TGAATATGGC
GGCGGCAATT GGTCGCAAAA TGTCGATGGT AGTTTTGAGC AAAATGTCTT TGCCTACTAC
ATGTCTATTG GTTGTAACCA TTGCAGCCAG CCTGTGTGTG TTAAAGCCTG CCCAACAGGT
GCAATGCATA AGCGCCGCGA AGATGGCTTA GTCCAAGTTG CCACTGAACT ATGTATTGGT
TGTGAAAGTT GTGCGAGGGC TTGCCCATAT GATGCACCAC AGCTGGATAT CGAGCGTAAG
GTGATGACCA AGTGTGATGG TTGCAGCGAT AGACTTGCTG AAGGTAAAAA GCCTATTTGC
GTTGATTCTT GTCCTTTACG GGCACTTGAC TTTGACACTA TGGATAATTT ACGAGCGAAA
TATGGAGAGG GGGATGGTCA TATTGCTCCC TTACCATCGC CATCGATTAC TTCGCCAAAC
TTGATTATCA AGGCCAATCG AAATGGTCAA CCAGTTGGTG GTAGTGGGCA ATTATTAAAC
CCTGCAGAAG TGTAA
|
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| Protein sequence | MTQQTQYGFY FDSSKCTGCK TCHIACKDRM TGLVRAKDDV MNNGVANLPG IIWRRVYEYG
GGNWSQNVDG SFEQNVFAYY MSIGCNHCSQ PVCVKACPTG AMHKRREDGL VQVATELCIG
CESCARACPY DAPQLDIERK VMTKCDGCSD RLAEGKKPIC VDSCPLRALD FDTMDNLRAK
YGEGDGHIAP LPSPSITSPN LIIKANRNGQ PVGGSGQLLN PAEV
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