Gene SO_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1402 
Symbol 
ID1169221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1457876 
End bp1458556 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID637343344 
Producthypothetical protein 
Protein accessionNP_717022 
Protein GI24372980 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTGC AAGAACTAAC CCAAAGCGAT CTGGATATAC TCAAGTCCAT CGAAAATATC 
GTCGATGGGA TTGCCGCCAT GTATGGCGAG CACACTGAGG TGGTGCTGCA CAGTTTAGAT 
GCTAAACATC CTTCGGTAAT AAAAATTGCC AATGGCCATG TCACAGGCCG TGAAGTAGGT 
GCGCCCATTA CCAACCTTGC CTTGCTCAAA CTCAAAACCG GTCAGGATAT TTCCAACTCT 
TATCTCACAA AATGCGCCAA TGGTAAGACG TTAAGATCGA TCACCACGGT GATCCGTAAC 
CCCAAAAACC TGCCGATTGG GCTACTGTGC ATTAATACCG ATATGGACGC GCCACTGCAG 
TCAGTACTGC GCACCATGAT GCCAGAGCAA CTCCTTGGCA GTGAACTCAC CAGTTCGCCC 
GAGGTGTTTG CCCGCAATAT CGATGAGGCA CTCCATAGCA CCATCGACAG TGTGAATCAT 
GAGATACGTG CTAATCCCGC GATTTCAGCT TCACAAAAGA GCCGCGAAAT CGTCAATCAA 
CTCCATGAGT TAGGGATTTT CGAACTCAAG GACAGCGCCC AAGTGGCTGC CACTCGATTG 
GGGATTTCAG TGCATTCGAT TTATCGGTAC TTGCGGGAAA TCAAAGCTAA TCAAGCTGAA 
AGCGAAAAAA GCCTCGCTTG A
 
Protein sequence
MKLQELTQSD LDILKSIENI VDGIAAMYGE HTEVVLHSLD AKHPSVIKIA NGHVTGREVG 
APITNLALLK LKTGQDISNS YLTKCANGKT LRSITTVIRN PKNLPIGLLC INTDMDAPLQ 
SVLRTMMPEQ LLGSELTSSP EVFARNIDEA LHSTIDSVNH EIRANPAISA SQKSREIVNQ 
LHELGIFELK DSAQVAATRL GISVHSIYRY LREIKANQAE SEKSLA