| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1341 |
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| Symbol | nadB |
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| ID | 1169162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1397393 |
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| End bp | 1399006 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343285 |
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| Product | L-aspartate oxidase |
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| Protein accession | NP_716961 |
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| Protein GI | 24372919 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG TAGTTGAACA CCAATCTGAC ATATTAGTCA TAGGTAGCGG TGCCGCAGGT
CTGACACTAG CTTTGCATCT TGCTGAAAAA GCAAACGTAA TTCTGCTCTC AAAAGGCCCA
CTCAGTGAAG GGTCAACATA CTACGCCCAG GGCGGTATCG CCTCTGTCTT CGATGAAAGT
GACACGATTG AATCCCACGT GGCCGATACA TTAGTCGCTG GTGCAGGTTT GTGTGATAAA
GACGTGGTGA CTTTTACCGC CGAAAATGCC AAGAGTGCAA TGCAATGGCT TATCGAATGT
GGGGTCGCCT TCGATAAAGA AGAAGCTGCA GGCAATAATC CCAAGGATGC ACCTTATCAC
CTTACGCGTG AAGGCGGTCA TAGCCATAGA CGCATTCTGC ATGCTGCGGA TGCGACAGGC
AAAGAGGTAC AAACTACGCT ACAAGAACGT GCCCTCGACC ACCCAAATAT CCAAGTTTTA
GAGCGCTATA ACGCCATCGA CCTTATCACC ACTCGCAAGT TAAACCGCCC TGGTAATCGC
GTATTAGGTG CCTATGTGTG GAACCGTAAT GCTGAGCAGG TGGAAACGAT CAAGGCTAAA
TTTGTCGCCT TAGCCACTGG TGGTAGCTCC AAGGTTTACC AGTATACTTC CAATCCCGAT
GTCGCTAGCG GTGATGGTAT TGCGATGGCT TGGCGTGCAG GTTGCCGCGT TGCCAATATG
GAATTCAATC AATTTCATCC AACCTGTCTT TACCATGCCG ATGCGCGCAA TTTCCTGCTG
ACCGAAGCAT TGCGCGGTGA AGGTGCTTAT TTACGTCGCC CTGATGGCAG CCGCTTTATG
CCAGACTTTG ATGAACGCGC TGAGTTAGCA CCTCGAGACA TCGTTGCCCG CGCCATCGAC
TATGAGATGA AACGTCTCGG TGCAGATTGT GTGTATCTGG ATATCAGCCA TAAAGATGCT
GACTTTGTGA TGAAGCATTT CCCGACCATT TACAGTCGCT GCTTAGAACT CGGTATCGAT
ATTACTAAGG ACGCCATTCC AGTGGTTCCC GCTGCCCACT ATACCTGCGG TGGCGTCATG
ACTGACCTAC ATGGTCAAAC CGATCTCAAT GGTCTTTATG CCATTGGTGA AGTTGCTTAT
ACTGGCTTAC ATGGCGCCAA TCGCCTTGCC AGTAACTCAC TGCTTGAGTG TCTCGTGTTT
GCCCGTGCAG CCTCTGAAGA TATTGAGAGC CAACTACACA AGATCCCATT ACCCGGGCTC
ATTCCTGCAT GGGATGAGAG TAAAGTCTCC AACTCGGATG AAGAAGTGGT TATTGCCCAC
AATTGGCACG AACTGCGCCT GTTTATGTGG GACTATGTGG GTATCGTTCG CTCAGATAAG
CGTTTGGAGC GCGCGCTACG CCGCTGCTTG ATGTTACAGC AAGAAATCCA AGAGTATTAC
AGCAACTTCA GAGTCAGTAA TAATTTGCTT GAACTGCGTA ACTTAGTGCA AGTGGCGGAA
CTGATTATCC GCTGCGCGAT GGATCGCAAA GAAAGCCGTG GCCTGCACTA CAATATTGAT
CATCCTGAAA AGTTAGATTC ACCGCTACCG ACCATTTTGC AACCTGAAAA ATAA
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| Protein sequence | MKQVVEHQSD ILVIGSGAAG LTLALHLAEK ANVILLSKGP LSEGSTYYAQ GGIASVFDES
DTIESHVADT LVAGAGLCDK DVVTFTAENA KSAMQWLIEC GVAFDKEEAA GNNPKDAPYH
LTREGGHSHR RILHAADATG KEVQTTLQER ALDHPNIQVL ERYNAIDLIT TRKLNRPGNR
VLGAYVWNRN AEQVETIKAK FVALATGGSS KVYQYTSNPD VASGDGIAMA WRAGCRVANM
EFNQFHPTCL YHADARNFLL TEALRGEGAY LRRPDGSRFM PDFDERAELA PRDIVARAID
YEMKRLGADC VYLDISHKDA DFVMKHFPTI YSRCLELGID ITKDAIPVVP AAHYTCGGVM
TDLHGQTDLN GLYAIGEVAY TGLHGANRLA SNSLLECLVF ARAASEDIES QLHKIPLPGL
IPAWDESKVS NSDEEVVIAH NWHELRLFMW DYVGIVRSDK RLERALRRCL MLQQEIQEYY
SNFRVSNNLL ELRNLVQVAE LIIRCAMDRK ESRGLHYNID HPEKLDSPLP TILQPEK
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